Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm43680-201ENSMUST00000199466 340 ntBASIC2.92□□□□□ -1.94
Trim28Q62318 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Trim28Q62318 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.92□□□□□ -1.94
Trim28Q62318 Gm23727-201ENSMUST00000083352 164 ntBASIC2.92□□□□□ -1.94
Trim28Q62318 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Trim28Q62318 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Trim28Q62318 Gm24276-201ENSMUST00000102181 110 ntBASIC2.91□□□□□ -1.94
Trim28Q62318 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trim28Q62318 Gm24911-201ENSMUST00000157292 136 ntBASIC2.91□□□□□ -1.94
Trim28Q62318 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.91□□□□□ -1.94
Trim28Q62318 Gm43199-201ENSMUST00000200019 307 ntBASIC2.91□□□□□ -1.94
Trim28Q62318 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.91□□□□□ -1.94
Trim28Q62318 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim28Q62318 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.91□□□□□ -1.94
Trim28Q62318 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Trim28Q62318 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Trim28Q62318 Gm25526-201ENSMUST00000104332 132 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm15536-201ENSMUST00000121411 114 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm7209-201ENSMUST00000122339 333 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm23182-201ENSMUST00000158688 135 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.9□□□□□ -1.95
Trim28Q62318 Gm22192-201ENSMUST00000175128 85 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm24926-201ENSMUST00000178053 79 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm22632-201ENSMUST00000178266 79 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm5224-201ENSMUST00000183060 350 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Mir7226-201ENSMUST00000184953 60 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm27959-201ENSMUST00000185172 111 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.9□□□□□ -1.95
Trim28Q62318 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.9□□□□□ -1.95
Trim28Q62318 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm10298-201ENSMUST00000074801 265 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm23303-201ENSMUST00000082714 152 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm24461-201ENSMUST00000082735 103 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm25632-201ENSMUST00000083112 85 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm24661-201ENSMUST00000083205 104 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm24453-201ENSMUST00000083346 76 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm24030-201ENSMUST00000083931 164 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.9□□□□□ -1.95
Trim28Q62318 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
Trim28Q62318 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Trim28Q62318 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.89□□□□□ -1.95
Trim28Q62318 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.89□□□□□ -1.95
Trim28Q62318 Gm25464-201ENSMUST00000175481 107 ntBASIC2.89□□□□□ -1.95
Trim28Q62318 Mir7657-201ENSMUST00000196051 57 ntBASIC2.89□□□□□ -1.95
Trim28Q62318 Gm44524-201ENSMUST00000203899 271 ntBASIC2.89□□□□□ -1.95
Trim28Q62318 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trim28Q62318 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trim28Q62318 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trim28Q62318 Gm12086-201ENSMUST00000120863 228 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Gm26280-201ENSMUST00000157096 101 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Gm22159-201ENSMUST00000158412 130 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Gm22093-201ENSMUST00000158980 111 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Mir6399-201ENSMUST00000184050 84 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Mir3069-201ENSMUST00000198802 65 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Gm15235-201ENSMUST00000200572 194 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Gm22509-201ENSMUST00000082775 107 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Gm22421-201ENSMUST00000083058 107 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim28Q62318 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim28Q62318 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.88□□□□□ -1.95
Trim28Q62318 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Trim28Q62318 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim28Q62318 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim28Q62318 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trim28Q62318 Gm22750-201ENSMUST00000102076 103 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm25980-201ENSMUST00000157176 218 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm25380-201ENSMUST00000175463 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm24641-201ENSMUST00000178055 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm25484-201ENSMUST00000178217 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm26138-201ENSMUST00000179236 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm22821-201ENSMUST00000179288 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm44429-201ENSMUST00000203542 186 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm43993-201ENSMUST00000203972 247 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.87□□□□□ -1.95
Trim28Q62318 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm23140-201ENSMUST00000082487 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm25142-201ENSMUST00000082698 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm23298-201ENSMUST00000083181 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm24614-201ENSMUST00000083269 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm22057-201ENSMUST00000083387 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Gm25516-201ENSMUST00000083857 107 ntBASIC2.87□□□□□ -1.95
Trim28Q62318 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Trim28Q62318 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim28Q62318 Gm12513-201ENSMUST00000118617 352 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Gm12934-201ENSMUST00000119221 343 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Gm8260-201ENSMUST00000119230 353 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Gm22477-201ENSMUST00000122569 316 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Gm25889-201ENSMUST00000157775 107 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Gm24237-201ENSMUST00000157790 132 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.86□□□□□ -1.95
Trim28Q62318 Gm26265-202ENSMUST00000196326 133 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Gm44320-201ENSMUST00000199276 86 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.86□□□□□ -1.95
Trim28Q62318 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Mir322-201ENSMUST00000083484 95 ntBASIC2.86□□□□□ -1.95
Trim28Q62318 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms