Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm22654-201ENSMUST00000157874 105 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm27793-201ENSMUST00000183405 76 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm23503-201ENSMUST00000083903 107 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm25627-201ENSMUST00000084003 153 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.4□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22597-201ENSMUST00000157602 80 ntBASIC-0.4□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22339-201ENSMUST00000157718 62 ntBASIC-0.4□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.4□□□□□ -2.47
Trav6d-4Q5R1I0 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
Trav6d-4Q5R1I0 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.4□□□□□ -2.47
Trav6d-4Q5R1I0 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 Gm35212-201ENSMUST00000196672 606 ntBASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 AC116465.1-201ENSMUST00000220324 235 ntBASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
Trav6d-4Q5R1I0 Gm22831-201ENSMUST00000102473 109 ntBASIC-0.42□□□□□ -2.48
Trav6d-4Q5R1I0 Gm11392-201ENSMUST00000181419 710 ntBASIC-0.42□□□□□ -2.48
Trav6d-4Q5R1I0 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.42□□□□□ -2.48
Trav6d-4Q5R1I0 Trdv3-201ENSMUST00000198551 309 ntBASIC-0.42□□□□□ -2.48
Trav6d-4Q5R1I0 Gm42164-201ENSMUST00000198881 379 ntBASIC-0.42□□□□□ -2.48
Trav6d-4Q5R1I0 Gm45658-201ENSMUST00000209197 580 ntBASIC-0.42□□□□□ -2.48
Trav6d-4Q5R1I0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
Trav6d-4Q5R1I0 Gm25799-201ENSMUST00000082643 107 ntBASIC-0.42□□□□□ -2.48
Trav6d-4Q5R1I0 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Gm26143-201ENSMUST00000104480 108 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24518-201ENSMUST00000180275 94 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Gm37918-201ENSMUST00000192071 120 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Gm25475-201ENSMUST00000082825 180 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Mir141-201ENSMUST00000083540 72 ntBASIC-0.43□□□□□ -2.48
Trav6d-4Q5R1I0 Gm26002-201ENSMUST00000101915 107 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Mir880-201ENSMUST00000104809 78 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm14803-201ENSMUST00000117163 361 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm14638-201ENSMUST00000121338 216 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24277-201ENSMUST00000158661 104 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC-0.44□□□□□ -2.48
Trav6d-4Q5R1I0 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Gm17132-201ENSMUST00000109542 1158 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Gm15077-201ENSMUST00000122344 362 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Gm22308-201ENSMUST00000177609 107 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24897-201ENSMUST00000179033 107 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC-0.45□□□□□ -2.48
Trav6d-4Q5R1I0 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm22328-201ENSMUST00000158074 112 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm28992-201ENSMUST00000190534 139 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 AC102291.2-201ENSMUST00000228083 367 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24535-201ENSMUST00000083140 107 ntBASIC-0.46□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Gm11798-201ENSMUST00000119150 421 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Gm24085-201ENSMUST00000175172 116 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 AC116589.9-201ENSMUST00000221462 908 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 AC173345.2-201ENSMUST00000222795 153 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 AC183092.1-201ENSMUST00000224301 153 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Gm23731-201ENSMUST00000083749 107 ntBASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC-0.47□□□□□ -2.48
Trav6d-4Q5R1I0 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm43114-201ENSMUST00000198298 343 ntBASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm44960-201ENSMUST00000207403 141 ntBASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm25855-201ENSMUST00000082787 72 ntBASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm26314-201ENSMUST00000083891 107 ntBASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
Trav6d-4Q5R1I0 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms