Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm26914-201ENSMUST00000182262 223 ntBASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Gm27898-201ENSMUST00000183987 80 ntBASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Gm28921-201ENSMUST00000190219 378 ntBASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Gm29490-201ENSMUST00000190923 342 ntBASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Mir6962-201ENSMUST00000199512 63 ntBASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Gm24311-201ENSMUST00000082570 104 ntBASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Mir490-201ENSMUST00000093567 84 ntBASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 Gm22215-201ENSMUST00000157558 96 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 Gm22555-201ENSMUST00000157801 62 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 Mir3569-201ENSMUST00000185080 58 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 Gm43250-201ENSMUST00000196536 273 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 Mir7661-201ENSMUST00000197023 61 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 Gm25627-201ENSMUST00000084003 153 ntBASIC0.63□□□□□ -2.31
Trav3-3Q5R1C3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm26135-201ENSMUST00000101993 72 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Mir695-201ENSMUST00000102261 109 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm23130-201ENSMUST00000104252 74 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm23636-201ENSMUST00000175070 95 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm23921-201ENSMUST00000175258 107 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Snord50b-201ENSMUST00000178497 72 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm10264-201ENSMUST00000220589 429 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Snord32a-201ENSMUST00000083285 83 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm25578-201ENSMUST00000083406 104 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm24164-201ENSMUST00000093663 104 ntBASIC0.62□□□□□ -2.31
Trav3-3Q5R1C3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm25938-201ENSMUST00000104139 166 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm24440-201ENSMUST00000157236 63 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm25768-201ENSMUST00000158570 98 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm24512-201ENSMUST00000174963 65 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm42533-201ENSMUST00000196247 157 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm44320-201ENSMUST00000199276 86 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm43367-201ENSMUST00000199986 625 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm18213-201ENSMUST00000207850 178 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm26329-201ENSMUST00000093723 110 ntBASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Trav3-3Q5R1C3 Gm24271-201ENSMUST00000102327 111 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Mir767-201ENSMUST00000103256 107 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Gm14761-201ENSMUST00000121363 262 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Gm25825-201ENSMUST00000157091 124 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Gm23898-201ENSMUST00000158111 103 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Gm23625-201ENSMUST00000082457 100 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Gm22704-201ENSMUST00000083027 137 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Gm26056-201ENSMUST00000083043 104 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Gm23851-201ENSMUST00000083831 103 ntBASIC0.6□□□□□ -2.31
Trav3-3Q5R1C3 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm24116-201ENSMUST00000103975 107 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm11856-201ENSMUST00000118712 276 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm15379-201ENSMUST00000121224 648 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm14491-201ENSMUST00000121919 199 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm26400-201ENSMUST00000175012 85 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm23355-201ENSMUST00000177614 107 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm23148-201ENSMUST00000180367 107 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm10105-201ENSMUST00000184601 270 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Mir7050-201ENSMUST00000184636 60 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm43884-201ENSMUST00000204251 559 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm25204-201ENSMUST00000082843 106 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm25258-201ENSMUST00000083049 107 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm24042-201ENSMUST00000083114 103 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm22294-201ENSMUST00000083308 104 ntBASIC0.59□□□□□ -2.31
Trav3-3Q5R1C3 Gm16032-201ENSMUST00000118534 168 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Gm14568-201ENSMUST00000119321 294 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Gm25781-201ENSMUST00000122527 84 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Gm23759-201ENSMUST00000158351 268 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Gm25166-201ENSMUST00000158909 111 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Gm20391-201ENSMUST00000174722 106 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Gm44921-201ENSMUST00000205290 301 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Gm22743-201ENSMUST00000083445 133 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
Trav3-3Q5R1C3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Trav3-3Q5R1C3 Gm25544-201ENSMUST00000122676 120 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms