Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm23232-201ENSMUST00000157300 105 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm22215-201ENSMUST00000157558 96 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm25884-201ENSMUST00000157782 62 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm22113-201ENSMUST00000158343 104 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm23008-201ENSMUST00000158946 80 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm7958-201ENSMUST00000178255 468 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm7950-201ENSMUST00000179633 468 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm26200-201ENSMUST00000180273 79 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm27640-201ENSMUST00000184580 147 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28110-201ENSMUST00000185782 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29057-201ENSMUST00000186468 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28737-201ENSMUST00000186808 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29147-201ENSMUST00000186846 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29118-201ENSMUST00000186908 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28433-201ENSMUST00000187085 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29227-201ENSMUST00000187139 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28759-201ENSMUST00000187621 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28831-201ENSMUST00000187739 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29034-201ENSMUST00000188099 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28752-201ENSMUST00000188340 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28569-201ENSMUST00000188748 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28120-201ENSMUST00000188812 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28369-201ENSMUST00000188993 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28537-201ENSMUST00000189026 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28861-201ENSMUST00000189681 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28717-201ENSMUST00000189950 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29180-201ENSMUST00000190003 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29575-201ENSMUST00000190597 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29631-201ENSMUST00000191065 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm28160-201ENSMUST00000191229 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm29469-201ENSMUST00000191448 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm37129-201ENSMUST00000195791 315 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm43250-201ENSMUST00000196536 273 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm44149-201ENSMUST00000204256 226 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.72□□□□□ -2.29
Nkx3-1P97436 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm24356-201ENSMUST00000082859 106 ntBASIC0.72□□□□□ -2.29
Nkx3-1P97436 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.71□□□□□ -2.29
Nkx3-1P97436 Gm14301-201ENSMUST00000120181 324 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm25781-201ENSMUST00000122527 84 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm24277-201ENSMUST00000158661 104 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Mir7093-201ENSMUST00000184195 101 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm29661-201ENSMUST00000186781 315 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm29308-201ENSMUST00000188863 315 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm38323-201ENSMUST00000192450 210 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm37089-201ENSMUST00000195616 129 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm34139-201ENSMUST00000196166 294 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.71□□□□□ -2.3
Nkx3-1P97436 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm23625-201ENSMUST00000082457 100 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm24625-201ENSMUST00000082622 130 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Snord96a-201ENSMUST00000082791 81 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm25038-201ENSMUST00000082928 130 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Gm23347-201ENSMUST00000083823 82 ntBASIC0.71□□□□□ -2.3
Nkx3-1P97436 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Nkx3-1P97436 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm12785-201ENSMUST00000122052 172 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm26358-201ENSMUST00000158215 97 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm24211-201ENSMUST00000158264 107 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm23759-201ENSMUST00000158351 268 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm29229-201ENSMUST00000188874 323 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm37399-201ENSMUST00000195224 416 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm36953-201ENSMUST00000195295 268 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm44301-201ENSMUST00000200362 143 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.7□□□□□ -2.3
Nkx3-1P97436 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm24966-201ENSMUST00000082443 79 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm25929-201ENSMUST00000082784 107 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm25128-201ENSMUST00000083339 76 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm24261-201ENSMUST00000083744 104 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm26329-201ENSMUST00000093723 110 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.7□□□□□ -2.3
Nkx3-1P97436 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Nkx3-1P97436 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm22469-201ENSMUST00000104118 133 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm24192-201ENSMUST00000157978 145 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm22945-201ENSMUST00000158557 157 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm28862-201ENSMUST00000188246 163 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm44325-201ENSMUST00000196757 77 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm5023-201ENSMUST00000217442 587 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm24920-201ENSMUST00000083018 85 ntBASIC0.69□□□□□ -2.3
Nkx3-1P97436 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
Nkx3-1P97436 Gm22689-201ENSMUST00000102452 110 ntBASIC0.68□□□□□ -2.3
Nkx3-1P97436 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms