Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Usp4P35123 Gm23600-201ENSMUST00000157260 71 ntBASIC2.71□□□□□ -1.98
Usp4P35123 Gm24911-201ENSMUST00000157292 136 ntBASIC2.71□□□□□ -1.98
Usp4P35123 Gm20438-201ENSMUST00000174441 329 ntBASIC2.71□□□□□ -1.98
Usp4P35123 Gm25528-201ENSMUST00000180264 132 ntBASIC2.71□□□□□ -1.98
Usp4P35123 Mir7013-201ENSMUST00000183540 72 ntBASIC2.71□□□□□ -1.98
Usp4P35123 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Usp4P35123 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Usp4P35123 Gm29603-201ENSMUST00000186792 334 ntBASIC2.71□□□□□ -1.98
Usp4P35123 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.71□□□□□ -1.98
Usp4P35123 Gm21064-202ENSMUST00000190583 278 ntBASIC2.71□□□□□ -1.98
Usp4P35123 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.71□□□□□ -1.98
Usp4P35123 Gm37037-201ENSMUST00000194475 424 ntBASIC2.71□□□□□ -1.98
Usp4P35123 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.71□□□□□ -1.98
Usp4P35123 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Usp4P35123 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Usp4P35123 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Usp4P35123 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Usp4P35123 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Usp4P35123 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm22486-201ENSMUST00000116815 137 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm14843-201ENSMUST00000119596 212 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm23980-201ENSMUST00000157135 158 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm22221-201ENSMUST00000157362 103 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm23223-201ENSMUST00000158119 127 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm23194-201ENSMUST00000158813 105 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Usp4P35123 Gm43626-201ENSMUST00000198575 162 ntBASIC2.7□□□□□ -1.98
Usp4P35123 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm25199-201ENSMUST00000083095 104 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm24615-201ENSMUST00000083268 113 ntBASIC2.7□□□□□ -1.98
Usp4P35123 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.7□□□□□ -1.98
Usp4P35123 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.7□□□□□ -1.98
Usp4P35123 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
Usp4P35123 Gm22967-201ENSMUST00000157956 239 ntBASIC2.69□□□□□ -1.98
Usp4P35123 Gm24358-201ENSMUST00000158424 288 ntBASIC2.69□□□□□ -1.98
Usp4P35123 Gm24816-201ENSMUST00000175311 151 ntBASIC2.69□□□□□ -1.98
Usp4P35123 Trbv7-201ENSMUST00000193339 402 ntBASIC2.69□□□□□ -1.98
Usp4P35123 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.69□□□□□ -1.98
Usp4P35123 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.69□□□□□ -1.98
Usp4P35123 Mir7118-201ENSMUST00000197760 61 ntBASIC2.69□□□□□ -1.98
Usp4P35123 Gm23947-201ENSMUST00000093636 107 ntBASIC2.69□□□□□ -1.98
Usp4P35123 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Usp4P35123 Mir669b-201ENSMUST00000102172 97 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm25879-201ENSMUST00000104330 107 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm26160-201ENSMUST00000158965 63 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm22500-201ENSMUST00000158982 99 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm25476-201ENSMUST00000175125 185 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Mir3076-201ENSMUST00000175415 60 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm23190-201ENSMUST00000180307 64 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm18546-201ENSMUST00000197245 676 ntBASIC2.68□□□□□ -1.98
Usp4P35123 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm44052-201ENSMUST00000203382 396 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm25130-201ENSMUST00000082650 156 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Gm10351-201ENSMUST00000087694 125 ntBASIC2.68□□□□□ -1.98
Usp4P35123 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Usp4P35123 Gm23651-201ENSMUST00000116755 120 ntBASIC2.67□□□□□ -1.98
Usp4P35123 Gm22011-201ENSMUST00000158790 123 ntBASIC2.67□□□□□ -1.98
Usp4P35123 Gm6788-201ENSMUST00000166459 270 ntBASIC2.67□□□□□ -1.98
Usp4P35123 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.67□□□□□ -1.98
Usp4P35123 Gm23963-201ENSMUST00000179603 77 ntBASIC2.67□□□□□ -1.98
Usp4P35123 Gm37807-201ENSMUST00000194310 190 ntBASIC2.67□□□□□ -1.98
Usp4P35123 Gm45522-201ENSMUST00000210784 166 ntBASIC2.67□□□□□ -1.98
Usp4P35123 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Usp4P35123 Gm24616-201ENSMUST00000083274 139 ntBASIC2.67□□□□□ -1.98
Usp4P35123 Gm25513-201ENSMUST00000083861 162 ntBASIC2.67□□□□□ -1.98
Usp4P35123 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Usp4P35123 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Usp4P35123 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Usp4P35123 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
Usp4P35123 Gm26247-201ENSMUST00000116702 91 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm14602-201ENSMUST00000118625 340 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm24598-201ENSMUST00000122510 74 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm22477-201ENSMUST00000122569 316 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.66□□□□□ -1.98
Usp4P35123 Gm24291-201ENSMUST00000157633 162 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm24634-201ENSMUST00000158672 107 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm44326-201ENSMUST00000198226 101 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm35736-201ENSMUST00000203681 313 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm44478-201ENSMUST00000204875 114 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm22686-201ENSMUST00000082847 100 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm24410-201ENSMUST00000083433 107 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm22828-201ENSMUST00000083768 107 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Gm10172-201ENSMUST00000085929 558 ntBASIC2.66□□□□□ -1.98
Usp4P35123 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Usp4P35123 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Usp4P35123 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.65□□□□□ -1.99
Usp4P35123 Gm23718-201ENSMUST00000157350 307 ntBASIC2.65□□□□□ -1.99
Usp4P35123 Gm25488-201ENSMUST00000158728 118 ntBASIC2.65□□□□□ -1.99
Usp4P35123 Gm27991-201ENSMUST00000184804 137 ntBASIC2.65□□□□□ -1.99
Usp4P35123 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.65□□□□□ -1.99
Usp4P35123 Mir186-201ENSMUST00000083497 71 ntBASIC2.65□□□□□ -1.99
Usp4P35123 Snord7-201ENSMUST00000083781 97 ntBASIC2.65□□□□□ -1.99
Usp4P35123 Gm24122-201ENSMUST00000104107 132 ntBASIC2.64□□□□□ -1.99
Usp4P35123 Gm43587-201ENSMUST00000199590 204 ntBASIC2.64□□□□□ -1.99
Usp4P35123 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.64□□□□□ -1.99
Usp4P35123 Gm22622-201ENSMUST00000082870 129 ntBASIC2.64□□□□□ -1.99
Usp4P35123 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms