Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm25130-201ENSMUST00000082650 156 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Hoxd9P28357 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Hoxd9P28357 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hoxd9P28357 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Hoxd9P28357 AC153950.1-201ENSMUST00000219916 3238 ntBASIC3.13□□□□□ -1.91
Hoxd9P28357 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Hoxd9P28357 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.13□□□□□ -1.91
Hoxd9P28357 Gm24896-201ENSMUST00000122741 135 ntBASIC3.13□□□□□ -1.91
Hoxd9P28357 Gm24911-201ENSMUST00000157292 136 ntBASIC3.13□□□□□ -1.91
Hoxd9P28357 Gm23671-201ENSMUST00000157472 103 ntBASIC3.13□□□□□ -1.91
Hoxd9P28357 Gm22770-201ENSMUST00000158368 67 ntBASIC3.13□□□□□ -1.91
Hoxd9P28357 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.13□□□□□ -1.91
Hoxd9P28357 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.13□□□□□ -1.91
Hoxd9P28357 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hoxd9P28357 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.13□□□□□ -1.91
Hoxd9P28357 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hoxd9P28357 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hoxd9P28357 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Hoxd9P28357 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Hoxd9P28357 Mir673-201ENSMUST00000102361 91 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Snord78-201ENSMUST00000104032 66 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm26074-201ENSMUST00000104063 129 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm24593-201ENSMUST00000122507 106 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm22796-201ENSMUST00000157234 106 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm25887-201ENSMUST00000157777 84 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Mir5136-201ENSMUST00000175573 76 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm43899-201ENSMUST00000203675 246 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.12□□□□□ -1.91
Hoxd9P28357 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm26265-201ENSMUST00000083277 135 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hoxd9P28357 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.12□□□□□ -1.91
Hoxd9P28357 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hoxd9P28357 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hoxd9P28357 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hoxd9P28357 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Hoxd9P28357 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd9P28357 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hoxd9P28357 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd9P28357 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hoxd9P28357 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hoxd9P28357 Gm24375-201ENSMUST00000104397 132 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 Gm24559-201ENSMUST00000157519 121 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 Gm25950-201ENSMUST00000175331 100 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 Gm29658-201ENSMUST00000185404 230 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 Gm38311-201ENSMUST00000192945 165 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 AC122327.1-201ENSMUST00000220778 108 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 Gm24977-201ENSMUST00000083106 163 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd9P28357 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd9P28357 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Hoxd9P28357 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.11□□□□□ -1.91
Hoxd9P28357 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hoxd9P28357 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.1□□□□□ -1.91
Hoxd9P28357 Gm24171-201ENSMUST00000104126 131 ntBASIC3.1□□□□□ -1.91
Hoxd9P28357 Gm24947-201ENSMUST00000158334 110 ntBASIC3.1□□□□□ -1.91
Hoxd9P28357 Mir3094-201ENSMUST00000175121 64 ntBASIC3.1□□□□□ -1.91
Hoxd9P28357 Gm24813-201ENSMUST00000175310 84 ntBASIC3.1□□□□□ -1.91
Hoxd9P28357 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.1□□□□□ -1.91
Hoxd9P28357 Gm44666-201ENSMUST00000208544 391 ntBASIC3.1□□□□□ -1.91
Hoxd9P28357 Gm22306-201ENSMUST00000082692 107 ntBASIC3.1□□□□□ -1.91
Hoxd9P28357 Gm22972-201ENSMUST00000083297 131 ntBASIC3.1□□□□□ -1.91
Hoxd9P28357 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Hoxd9P28357 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Hoxd9P28357 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Hoxd9P28357 Gm24118-201ENSMUST00000103972 126 ntBASIC3.09□□□□□ -1.91
Hoxd9P28357 Gm27374-201ENSMUST00000183660 81 ntBASIC3.09□□□□□ -1.91
Hoxd9P28357 Mir8090-201ENSMUST00000185078 136 ntBASIC3.09□□□□□ -1.91
Hoxd9P28357 Gm9765-201ENSMUST00000043170 321 ntBASIC3.09□□□□□ -1.91
Hoxd9P28357 Gm23723-201ENSMUST00000082996 132 ntBASIC3.09□□□□□ -1.91
Hoxd9P28357 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.09□□□□□ -1.91
Hoxd9P28357 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Hoxd9P28357 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
Hoxd9P28357 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Hoxd9P28357 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hoxd9P28357 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm16533-201ENSMUST00000140035 228 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm22319-201ENSMUST00000157147 122 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm22163-201ENSMUST00000158408 135 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm25771-201ENSMUST00000158565 144 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm37428-201ENSMUST00000193886 137 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm44600-201ENSMUST00000208540 111 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.08□□□□□ -1.92
Hoxd9P28357 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hoxd9P28357 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Hoxd9P28357 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hoxd9P28357 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms