Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25697-201ENSMUST00000082902 98 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm24523-201ENSMUST00000083965 132 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Mir496a-201ENSMUST00000093627 79 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm22750-201ENSMUST00000102076 103 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm23011-201ENSMUST00000104148 132 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm23336-201ENSMUST00000117023 123 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm23355-201ENSMUST00000177614 107 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm23148-201ENSMUST00000180367 107 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm27898-201ENSMUST00000183987 80 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm29229-201ENSMUST00000188874 323 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.75□□□□□ -2.29
Sdc1P18828 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm25258-201ENSMUST00000083049 107 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.75□□□□□ -2.29
Sdc1P18828 Gm25938-201ENSMUST00000104139 166 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 Gm22544-201ENSMUST00000104349 127 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Sdc1P18828 Gm26968-201ENSMUST00000182894 481 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 Gm29014-201ENSMUST00000191422 326 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 Mir7118-201ENSMUST00000197760 61 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 Gm44301-201ENSMUST00000200362 143 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 Gm43898-201ENSMUST00000204456 424 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.74□□□□□ -2.29
Sdc1P18828 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 Gm22294-201ENSMUST00000083308 104 ntBASIC0.74□□□□□ -2.29
Sdc1P18828 Mir767-201ENSMUST00000103256 107 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 Gm14491-201ENSMUST00000121919 199 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 Gm23230-201ENSMUST00000157298 133 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 Gm26029-201ENSMUST00000158659 132 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 Gm26400-201ENSMUST00000175012 85 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Sdc1P18828 Gm28794-201ENSMUST00000185276 136 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 Gm43238-201ENSMUST00000196463 359 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 Gm25930-201ENSMUST00000082785 107 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 Gm22704-201ENSMUST00000083027 137 ntBASIC0.73□□□□□ -2.29
Sdc1P18828 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm22780-201ENSMUST00000104084 132 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm16032-201ENSMUST00000118534 168 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm22598-201ENSMUST00000157600 127 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm24401-201ENSMUST00000157868 91 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm23996-201ENSMUST00000158062 131 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Mir3098-201ENSMUST00000175416 87 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm38323-201ENSMUST00000192450 210 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm44326-201ENSMUST00000198226 101 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm24311-201ENSMUST00000082570 104 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm22743-201ENSMUST00000083445 133 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm25627-201ENSMUST00000084003 153 ntBASIC0.72□□□□□ -2.29
Sdc1P18828 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Sdc1P18828 Gm24271-201ENSMUST00000102327 111 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm26474-201ENSMUST00000116762 122 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm14574-201ENSMUST00000120644 279 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm25825-201ENSMUST00000157091 124 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm23898-201ENSMUST00000158111 103 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm28921-201ENSMUST00000190219 378 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm42533-201ENSMUST00000196247 157 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm43624-201ENSMUST00000197368 180 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm10264-201ENSMUST00000220589 429 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm25078-201ENSMUST00000082530 107 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm24252-201ENSMUST00000083700 132 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm23851-201ENSMUST00000083831 103 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.71□□□□□ -2.3
Sdc1P18828 Mir343-201ENSMUST00000102360 75 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Gm24116-201ENSMUST00000103975 107 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Gm24504-201ENSMUST00000157679 100 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Gm23759-201ENSMUST00000158351 268 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Gm42622-201ENSMUST00000197229 355 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Mir6962-201ENSMUST00000199512 63 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Gm44921-201ENSMUST00000205290 301 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Snord32a-201ENSMUST00000083285 83 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Gm25578-201ENSMUST00000083406 104 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Gm24164-201ENSMUST00000093663 104 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.7□□□□□ -2.3
Sdc1P18828 Gm11572-201ENSMUST00000119164 120 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Gm25827-201ENSMUST00000157089 107 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Gm24440-201ENSMUST00000157236 63 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Gm24512-201ENSMUST00000174963 65 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Gm38050-201ENSMUST00000191904 238 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Gm36946-201ENSMUST00000192706 435 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Gm38113-201ENSMUST00000193704 201 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Gm18213-201ENSMUST00000207850 178 ntBASIC0.69□□□□□ -2.3
Sdc1P18828 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Sdc1P18828 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.68□□□□□ -2.3
Sdc1P18828 Mir695-201ENSMUST00000102261 109 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm11856-201ENSMUST00000118712 276 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm12785-201ENSMUST00000122052 172 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.68□□□□□ -2.3
Sdc1P18828 Gm22945-201ENSMUST00000158557 157 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm26022-201ENSMUST00000158663 108 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm25166-201ENSMUST00000158909 111 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm20386-201ENSMUST00000174010 132 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm25671-201ENSMUST00000178612 105 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm23307-201ENSMUST00000179167 105 ntBASIC0.68□□□□□ -2.3
Sdc1P18828 Gm25286-201ENSMUST00000179790 105 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 155.7 ms