Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm22863-201ENSMUST00000180265 94 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm28862-201ENSMUST00000188246 163 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm38323-201ENSMUST00000192450 210 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm38113-201ENSMUST00000193704 201 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm44358-201ENSMUST00000196301 98 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm23627-201ENSMUST00000082459 107 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm22502-201ENSMUST00000082488 107 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm23614-201ENSMUST00000082598 107 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm22977-201ENSMUST00000082615 107 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm24149-201ENSMUST00000082757 107 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm24152-201ENSMUST00000082764 163 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm24356-201ENSMUST00000082859 106 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Mir27b-201ENSMUST00000083541 73 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm22689-201ENSMUST00000102452 110 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Gm25787-201ENSMUST00000104709 92 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Gm12433-201ENSMUST00000119659 255 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Gm23435-201ENSMUST00000157183 156 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Gm25434-201ENSMUST00000158278 167 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Mir6540-201ENSMUST00000184886 108 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Gm37337-201ENSMUST00000192601 993 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.74□□□□□ -2.29
Cdx1P18111 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.74□□□□□ -2.29
Cdx1P18111 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.74□□□□□ -2.29
Cdx1P18111 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Mir22-201ENSMUST00000083595 95 ntBASIC0.74□□□□□ -2.29
Cdx1P18111 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Cdx1P18111 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
Cdx1P18111 Gm11792-201ENSMUST00000120640 168 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 Gm27974-201ENSMUST00000183415 105 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 Gm28489-201ENSMUST00000186655 316 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 Gm42622-201ENSMUST00000197229 355 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 Gm20144-201ENSMUST00000203031 165 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.73□□□□□ -2.29
Cdx1P18111 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 DQ267101-201ENSMUST00000082562 73 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 Gm3867-201ENSMUST00000086108 279 ntBASIC0.73□□□□□ -2.29
Cdx1P18111 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
Cdx1P18111 Gm24498-201ENSMUST00000158445 102 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 Gm23191-201ENSMUST00000179147 107 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 Mir6364-201ENSMUST00000183396 86 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 Gm18291-201ENSMUST00000190791 301 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 Gm44811-201ENSMUST00000209120 228 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 Gm24966-201ENSMUST00000082443 79 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 Gm25079-201ENSMUST00000082529 203 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 Gm24523-201ENSMUST00000083965 132 ntBASIC0.72□□□□□ -2.29
Cdx1P18111 Gm25416-201ENSMUST00000104221 107 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm22791-201ENSMUST00000157232 145 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm22435-201ENSMUST00000158552 128 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Snora24-201ENSMUST00000174989 130 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm24810-201ENSMUST00000175317 70 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm24487-201ENSMUST00000178017 63 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm23660-201ENSMUST00000178362 79 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm24088-201ENSMUST00000179100 79 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm29490-201ENSMUST00000190923 342 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm28408-201ENSMUST00000191557 463 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm37801-201ENSMUST00000194754 274 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm42533-201ENSMUST00000196247 157 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm43367-201ENSMUST00000199986 625 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm45704-201ENSMUST00000212582 403 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.71□□□□□ -2.3
Cdx1P18111 Gm22685-201ENSMUST00000082848 106 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm23041-201ENSMUST00000083868 106 ntBASIC0.71□□□□□ -2.3
Cdx1P18111 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Cdx1P18111 Gm26338-201ENSMUST00000102372 110 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm25909-201ENSMUST00000157619 121 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm24853-201ENSMUST00000158026 121 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm24499-201ENSMUST00000158446 104 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm22945-201ENSMUST00000158557 157 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm28927-201ENSMUST00000191528 272 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm44326-201ENSMUST00000198226 101 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm24311-201ENSMUST00000082570 104 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm22884-201ENSMUST00000083127 140 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Snord32a-201ENSMUST00000083285 83 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm25513-201ENSMUST00000083861 162 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Mir362-201ENSMUST00000093592 65 ntBASIC0.7□□□□□ -2.3
Cdx1P18111 Gm22545-201ENSMUST00000104350 132 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Gm25773-201ENSMUST00000116718 127 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Gm22709-201ENSMUST00000116893 111 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Gm14782-201ENSMUST00000120151 195 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Gm11334-201ENSMUST00000121969 156 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Gm16358-201ENSMUST00000146046 210 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Gm24288-201ENSMUST00000157630 144 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Mir6346-201ENSMUST00000183982 81 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Gm38050-201ENSMUST00000191904 238 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 Gm42855-201ENSMUST00000197388 253 ntBASIC0.69□□□□□ -2.3
Cdx1P18111 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Cdx1P18111 Gm43220-201ENSMUST00000199299 282 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms