Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 AC122905.2-201ENSMUST00000220325 269 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm14400-201ENSMUST00000117234 2135 ntBASIC-0.06□□□□□ -2.42
Col1a1P11087 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
Col1a1P11087 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.06□□□□□ -2.42
Col1a1P11087 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.06□□□□□ -2.42
Col1a1P11087 Gm22239-201ENSMUST00000175220 103 ntBASIC-0.06□□□□□ -2.42
Col1a1P11087 Gm25451-201ENSMUST00000177832 121 ntBASIC-0.06□□□□□ -2.42
Col1a1P11087 Gm44282-201ENSMUST00000203199 190 ntBASIC-0.06□□□□□ -2.42
Col1a1P11087 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Col1a1P11087 Gm25475-201ENSMUST00000082825 180 ntBASIC-0.06□□□□□ -2.42
Col1a1P11087 Gm24172-201ENSMUST00000104127 117 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Gm12225-201ENSMUST00000117995 298 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Gm24754-201ENSMUST00000177997 107 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Gm24862-201ENSMUST00000179103 79 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Gm23310-201ENSMUST00000179105 79 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Gm25461-201ENSMUST00000179293 79 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Gm37128-201ENSMUST00000192599 232 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 AC153141.1-201ENSMUST00000218636 501 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
Col1a1P11087 Gm23629-201ENSMUST00000082465 107 ntBASIC-0.07□□□□□ -2.42
Col1a1P11087 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm13729-201ENSMUST00000120328 406 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm22654-201ENSMUST00000157874 105 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm23838-201ENSMUST00000158067 162 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm3221-201ENSMUST00000164869 440 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm29350-201ENSMUST00000189141 541 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 AC153864.2-201ENSMUST00000220424 292 ntBASIC-0.08□□□□□ -2.42
Col1a1P11087 Gm25318-201ENSMUST00000122554 314 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm16539-201ENSMUST00000160086 327 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm17054-201ENSMUST00000169811 259 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm42805-201ENSMUST00000196158 276 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm23055-201ENSMUST00000082805 94 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Mir500-201ENSMUST00000093600 92 ntBASIC-0.09□□□□□ -2.42
Col1a1P11087 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.1□□□□□ -2.42
Col1a1P11087 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.1□□□□□ -2.42
Col1a1P11087 Gm23853-201ENSMUST00000158375 104 ntBASIC-0.1□□□□□ -2.42
Col1a1P11087 Gm35212-201ENSMUST00000196672 606 ntBASIC-0.1□□□□□ -2.42
Col1a1P11087 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.1□□□□□ -2.42
Col1a1P11087 CT033781.2-201ENSMUST00000221113 153 ntBASIC-0.1□□□□□ -2.42
Col1a1P11087 Gm25513-201ENSMUST00000083861 162 ntBASIC-0.1□□□□□ -2.42
Col1a1P11087 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm15077-201ENSMUST00000122344 362 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm16588-201ENSMUST00000162889 355 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm20391-201ENSMUST00000174722 106 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm18417-201ENSMUST00000176564 648 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm24625-201ENSMUST00000082622 130 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm25896-201ENSMUST00000083713 136 ntBASIC-0.1□□□□□ -2.43
Col1a1P11087 Gm25784-201ENSMUST00000122524 81 ntBASIC-0.11□□□□□ -2.43
Col1a1P11087 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-0.11□□□□□ -2.43
Col1a1P11087 Gm22281-201ENSMUST00000157198 103 ntBASIC-0.11□□□□□ -2.43
Col1a1P11087 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.11□□□□□ -2.43
Col1a1P11087 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.11□□□□□ -2.43
Col1a1P11087 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.11□□□□□ -2.43
Col1a1P11087 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.11□□□□□ -2.43
Col1a1P11087 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-0.11□□□□□ -2.43
Col1a1P11087 Gm24338-201ENSMUST00000104205 127 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm11410-201ENSMUST00000120053 1143 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm22236-201ENSMUST00000157093 106 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC-0.12□□□□□ -2.43
Col1a1P11087 AC125167.1-201ENSMUST00000198698 141 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm43220-201ENSMUST00000199299 282 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.12□□□□□ -2.43
Col1a1P11087 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.12□□□□□ -2.43
Col1a1P11087 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.13□□□□□ -2.43
Col1a1P11087 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.13□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms