Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm25992-201ENSMUST00000102437 109 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Cldn1O88551 Gm24629-201ENSMUST00000122762 89 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm24632-201ENSMUST00000122770 323 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm23328-201ENSMUST00000157418 132 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm22315-201ENSMUST00000158010 143 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm22537-201ENSMUST00000158172 199 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm24677-201ENSMUST00000158755 150 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm23474-201ENSMUST00000158884 75 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm23340-201ENSMUST00000158955 123 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
Cldn1O88551 Gm7958-201ENSMUST00000178255 468 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm7950-201ENSMUST00000179633 468 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm28579-201ENSMUST00000186143 369 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Cldn1O88551 Gm37801-201ENSMUST00000194754 274 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
Cldn1O88551 Gm24966-201ENSMUST00000082443 79 ntBASIC1.28□□□□□ -2.2
Cldn1O88551 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Cldn1O88551 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Cldn1O88551 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
Cldn1O88551 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Cldn1O88551 Snord71-201ENSMUST00000104361 85 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm23987-201ENSMUST00000117039 129 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm22434-201ENSMUST00000158549 122 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm27248-201ENSMUST00000184004 166 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Mir6985-201ENSMUST00000184641 61 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Mir6419-201ENSMUST00000184784 113 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm27997-201ENSMUST00000184942 69 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm29147-201ENSMUST00000186846 315 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm29227-201ENSMUST00000187139 315 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm29034-201ENSMUST00000188099 315 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm28160-201ENSMUST00000191229 315 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Cldn1O88551 Gm37129-201ENSMUST00000195791 315 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm45673-201ENSMUST00000210293 358 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.27□□□□□ -2.21
Cldn1O88551 Gm22935-201ENSMUST00000103960 104 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Mir669i-201ENSMUST00000117007 127 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm14937-201ENSMUST00000119709 208 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.26□□□□□ -2.21
Cldn1O88551 Gm22448-201ENSMUST00000179254 107 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm28008-201ENSMUST00000184021 186 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm27540-201ENSMUST00000184950 187 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm29603-201ENSMUST00000186792 334 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm37763-201ENSMUST00000193445 120 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm42834-201ENSMUST00000196845 256 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm5010-201ENSMUST00000213131 260 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Gm29818-201ENSMUST00000218070 165 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.26□□□□□ -2.21
Cldn1O88551 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
Cldn1O88551 Gm26135-201ENSMUST00000101993 72 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Cldn1O88551 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Cldn1O88551 Gm24116-201ENSMUST00000103975 107 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm12924-201ENSMUST00000121747 318 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm13725-201ENSMUST00000122139 207 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm22479-201ENSMUST00000122566 81 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm22814-201ENSMUST00000157452 104 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm22963-201ENSMUST00000157960 91 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Snord50b-201ENSMUST00000178497 72 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Cldn1O88551 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.25□□□□□ -2.21
Cldn1O88551 Gm45543-201ENSMUST00000209327 88 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm45616-201ENSMUST00000211711 319 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.25□□□□□ -2.21
Cldn1O88551 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm23140-201ENSMUST00000082487 107 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Mir344-201ENSMUST00000083634 95 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Gm26107-201ENSMUST00000083972 107 ntBASIC1.25□□□□□ -2.21
Cldn1O88551 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.25□□□□□ -2.21
Cldn1O88551 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.25□□□□□ -2.21
Cldn1O88551 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 Gm11606-201ENSMUST00000120706 617 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 Gm22027-201ENSMUST00000122737 127 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 Gm24668-201ENSMUST00000158935 104 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 Mir5624-201ENSMUST00000176635 61 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Cldn1O88551 Gm29308-201ENSMUST00000188863 315 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.24□□□□□ -2.21
Cldn1O88551 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Cldn1O88551 Gm23170-201ENSMUST00000157158 106 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Gm23390-201ENSMUST00000157393 106 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Gm24501-201ENSMUST00000158452 62 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Gm24229-201ENSMUST00000158830 118 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Mir1954-201ENSMUST00000175595 86 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Gm27517-201ENSMUST00000184347 236 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Gm37693-201ENSMUST00000194562 234 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Mir465d-201ENSMUST00000196314 58 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Mir7227-201ENSMUST00000200408 59 ntBASIC1.23□□□□□ -2.21
Cldn1O88551 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Cldn1O88551 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms