Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm22027-201ENSMUST00000122737 127 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Cdh16O88338 Gm22221-201ENSMUST00000157362 103 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm26150-201ENSMUST00000157426 151 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm23579-201ENSMUST00000158528 103 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm22448-201ENSMUST00000179254 107 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm27997-201ENSMUST00000184942 69 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm27540-201ENSMUST00000184950 187 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm37338-201ENSMUST00000191986 127 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm5010-201ENSMUST00000213131 260 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm10092-201ENSMUST00000077110 180 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm23406-201ENSMUST00000082537 122 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Gm25789-201ENSMUST00000083294 76 ntBASIC1.17□□□□□ -2.22
Cdh16O88338 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Cdh16O88338 Gm26080-201ENSMUST00000104069 131 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Gm24283-201ENSMUST00000104233 107 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Gm14937-201ENSMUST00000119709 208 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Gm24777-201ENSMUST00000157644 107 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Mir7675-201ENSMUST00000184262 58 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Gm42594-201ENSMUST00000199511 246 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Gm23055-201ENSMUST00000082805 94 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Gm23377-201ENSMUST00000082943 126 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Gm24536-201ENSMUST00000083144 107 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Mir211-201ENSMUST00000083651 106 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.16□□□□□ -2.22
Cdh16O88338 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Cdh16O88338 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Cdh16O88338 Mir669i-201ENSMUST00000117007 127 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm22883-201ENSMUST00000157376 106 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Rnu7-201ENSMUST00000158458 62 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm23208-201ENSMUST00000158666 127 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Mir5624-201ENSMUST00000176635 61 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm23267-201ENSMUST00000178490 132 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm27905-201ENSMUST00000184005 207 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29512-201ENSMUST00000185544 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28110-201ENSMUST00000185782 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29057-201ENSMUST00000186468 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29661-201ENSMUST00000186781 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28737-201ENSMUST00000186808 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29118-201ENSMUST00000186908 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28433-201ENSMUST00000187085 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28759-201ENSMUST00000187621 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28831-201ENSMUST00000187739 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28200-201ENSMUST00000187778 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28752-201ENSMUST00000188340 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29378-201ENSMUST00000188723 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28569-201ENSMUST00000188748 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28120-201ENSMUST00000188812 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28369-201ENSMUST00000188993 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28912-201ENSMUST00000189001 234 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29037-201ENSMUST00000189092 313 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28909-201ENSMUST00000189406 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm9156-201ENSMUST00000189660 463 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm28861-201ENSMUST00000189681 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29180-201ENSMUST00000190003 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29575-201ENSMUST00000190597 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29469-201ENSMUST00000191448 315 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm29665-201ENSMUST00000191457 528 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Mir7227-201ENSMUST00000200408 59 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm22287-201ENSMUST00000083197 107 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm22294-201ENSMUST00000083308 104 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.15□□□□□ -2.23
Cdh16O88338 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Cdh16O88338 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Cdh16O88338 Gm23640-201ENSMUST00000157860 104 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Gm26089-201ENSMUST00000157898 107 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Gm2962-201ENSMUST00000159266 336 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Gm23003-201ENSMUST00000179948 107 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Gm44373-201ENSMUST00000196112 169 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Gm44055-201ENSMUST00000204376 247 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Gm25079-201ENSMUST00000082529 203 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Snord118-201ENSMUST00000082965 135 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Gm24042-201ENSMUST00000083114 103 ntBASIC1.14□□□□□ -2.23
Cdh16O88338 Gm23941-201ENSMUST00000101953 107 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm24915-201ENSMUST00000157288 78 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm22216-201ENSMUST00000157557 114 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Mir1967-201ENSMUST00000157789 82 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm25371-201ENSMUST00000158162 101 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm26402-201ENSMUST00000158499 113 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm23182-201ENSMUST00000158688 135 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm24510-201ENSMUST00000174965 94 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm19123-201ENSMUST00000190716 651 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm37693-201ENSMUST00000194562 234 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Cdh16O88338 Gm43035-201ENSMUST00000197626 517 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm23370-201ENSMUST00000199545 130 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.13□□□□□ -2.23
Cdh16O88338 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Cdh16O88338 Gm24764-201ENSMUST00000083686 199 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms