Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Mir1904-201ENSMUST00000122702 80 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm22281-201ENSMUST00000157198 103 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm23390-201ENSMUST00000157393 106 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm24288-201ENSMUST00000157630 144 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm22447-201ENSMUST00000158155 92 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm22537-201ENSMUST00000158172 199 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm24211-201ENSMUST00000158264 107 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm25161-201ENSMUST00000158913 132 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm20144-201ENSMUST00000203031 165 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm44811-201ENSMUST00000209120 228 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm24355-201ENSMUST00000082858 122 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Gm24920-201ENSMUST00000083018 85 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Mir221-201ENSMUST00000083488 95 ntBASIC0.95□□□□□ -2.26
Lmx1aQ9JKU8 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm26339-201ENSMUST00000102368 99 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm25805-201ENSMUST00000122788 108 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm23783-201ENSMUST00000157941 102 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm22944-201ENSMUST00000158662 133 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm22663-201ENSMUST00000158721 102 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm26363-201ENSMUST00000158866 83 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm29613-201ENSMUST00000185846 313 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm29661-201ENSMUST00000186781 315 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm29544-201ENSMUST00000188860 313 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm29308-201ENSMUST00000188863 315 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm28992-201ENSMUST00000190534 139 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm28808-201ENSMUST00000190978 313 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 Gm23245-201ENSMUST00000083370 135 ntBASIC0.94□□□□□ -2.26
Lmx1aQ9JKU8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm13992-201ENSMUST00000120558 156 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm24504-201ENSMUST00000157679 100 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm23339-201ENSMUST00000158962 139 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Traj60-201ENSMUST00000167781 54 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm23355-201ENSMUST00000177614 107 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm28489-201ENSMUST00000186655 316 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm43220-201ENSMUST00000199299 282 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm23625-201ENSMUST00000082457 100 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.93□□□□□ -2.26
Lmx1aQ9JKU8 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm24579-201ENSMUST00000103964 144 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm23013-201ENSMUST00000104146 106 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm14574-201ENSMUST00000120644 279 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm14922-201ENSMUST00000121131 163 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm22598-201ENSMUST00000157600 127 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm17067-202ENSMUST00000180131 123 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm27317-201ENSMUST00000183533 95 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28110-201ENSMUST00000185782 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29057-201ENSMUST00000186468 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28737-201ENSMUST00000186808 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29147-201ENSMUST00000186846 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29118-201ENSMUST00000186908 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28433-201ENSMUST00000187085 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29227-201ENSMUST00000187139 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28759-201ENSMUST00000187621 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28831-201ENSMUST00000187739 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29034-201ENSMUST00000188099 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28752-201ENSMUST00000188340 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28569-201ENSMUST00000188748 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28120-201ENSMUST00000188812 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28369-201ENSMUST00000188993 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28912-201ENSMUST00000189001 234 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28537-201ENSMUST00000189026 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28861-201ENSMUST00000189681 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28717-201ENSMUST00000189950 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29180-201ENSMUST00000190003 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29575-201ENSMUST00000190597 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28288-201ENSMUST00000191019 214 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29631-201ENSMUST00000191065 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm28160-201ENSMUST00000191229 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm29469-201ENSMUST00000191448 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm37129-201ENSMUST00000195791 315 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm43238-201ENSMUST00000196463 359 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm43624-201ENSMUST00000197368 180 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm44462-201ENSMUST00000199696 129 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm44052-201ENSMUST00000203382 396 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm44149-201ENSMUST00000204256 226 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Lmx1aQ9JKU8 Gm23126-201ENSMUST00000104260 134 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms