Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.46□□□□□ -2.18
Scn5aQ9JJV9 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.46□□□□□ -2.18
Scn5aQ9JJV9 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.46□□□□□ -2.18
Scn5aQ9JJV9 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Scn5aQ9JJV9 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.46□□□□□ -2.18
Scn5aQ9JJV9 Gm24590-201ENSMUST00000116699 119 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm14803-201ENSMUST00000117163 361 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm29140-201ENSMUST00000190187 476 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm29665-201ENSMUST00000191457 528 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm43993-201ENSMUST00000203972 247 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm43865-201ENSMUST00000204721 127 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Mir448-201ENSMUST00000083516 112 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm26314-201ENSMUST00000083891 107 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm24896-201ENSMUST00000122741 135 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm23718-201ENSMUST00000157350 307 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Mir7052-201ENSMUST00000184821 65 ntBASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Scn5aQ9JJV9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Mir1949-201ENSMUST00000157434 141 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Rnu7-201ENSMUST00000158458 62 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm2829-201ENSMUST00000213121 499 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm25274-201ENSMUST00000104296 135 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm14782-201ENSMUST00000120151 195 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm13967-201ENSMUST00000120404 380 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Mir1967-201ENSMUST00000157789 82 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm22768-201ENSMUST00000158366 153 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm25994-201ENSMUST00000175392 101 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Mir7663-201ENSMUST00000183950 61 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm18357-201ENSMUST00000188184 580 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm26265-202ENSMUST00000196326 133 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm43583-201ENSMUST00000199235 303 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Gm18188-201ENSMUST00000219386 478 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.44□□□□□ -2.18
Scn5aQ9JJV9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm24079-201ENSMUST00000104352 132 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm12837-201ENSMUST00000120131 373 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm45005-201ENSMUST00000206640 157 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm23625-201ENSMUST00000082457 100 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm25589-201ENSMUST00000082502 166 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm23679-201ENSMUST00000083161 119 ntBASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
Scn5aQ9JJV9 Gm15692-201ENSMUST00000152173 352 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm24388-201ENSMUST00000177872 107 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm27271-201ENSMUST00000183509 170 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm25875-201ENSMUST00000104323 107 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Mir875-201ENSMUST00000104698 78 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm15214-201ENSMUST00000122155 470 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm23579-201ENSMUST00000158528 103 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm23340-201ENSMUST00000158955 123 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.42□□□□□ -2.18
Scn5aQ9JJV9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Gm12351-201ENSMUST00000118727 292 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Gm23983-201ENSMUST00000157142 114 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Gm25059-201ENSMUST00000157367 117 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Gm22338-201ENSMUST00000157715 129 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Gm22510-201ENSMUST00000179304 79 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Gm26336-201ENSMUST00000179449 79 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Gm26390-201ENSMUST00000179628 79 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.41□□□□□ -2.18
Scn5aQ9JJV9 Gm22193-201ENSMUST00000116868 76 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm13725-201ENSMUST00000122139 207 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm25115-201ENSMUST00000157187 140 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm24847-201ENSMUST00000158032 108 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm26405-201ENSMUST00000158495 100 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm24225-201ENSMUST00000158825 98 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm45754-201ENSMUST00000212380 279 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm22358-201ENSMUST00000082877 122 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm25188-201ENSMUST00000083913 122 ntBASIC1.4□□□□□ -2.18
Scn5aQ9JJV9 Gm26156-201ENSMUST00000116999 123 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms