Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm13588-201ENSMUST00000120026 135 ntBASIC3.06□□□□□ -1.92
Trim39Q9ESN2 Gm23671-201ENSMUST00000157472 103 ntBASIC3.06□□□□□ -1.92
Trim39Q9ESN2 Gm25572-201ENSMUST00000157527 172 ntBASIC3.06□□□□□ -1.92
Trim39Q9ESN2 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.06□□□□□ -1.92
Trim39Q9ESN2 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Gm25022-201ENSMUST00000102205 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Gm13246-201ENSMUST00000120994 315 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Gm24911-201ENSMUST00000157292 136 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Gm23253-201ENSMUST00000157441 104 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir1927-201ENSMUST00000158579 109 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Gm25367-201ENSMUST00000158846 106 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-6-201ENSMUST00000177790 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-3-201ENSMUST00000178082 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-7-201ENSMUST00000178635 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-10-201ENSMUST00000179320 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-5-201ENSMUST00000179352 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-2-201ENSMUST00000179447 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-9-201ENSMUST00000179752 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-4-201ENSMUST00000179923 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Mir467a-8-201ENSMUST00000180070 83 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Gm25124-201ENSMUST00000083345 164 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.05□□□□□ -1.92
Trim39Q9ESN2 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm25727-201ENSMUST00000104522 131 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Mir1934-201ENSMUST00000158127 83 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm23859-201ENSMUST00000158383 64 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm25488-201ENSMUST00000158728 118 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm22910-201ENSMUST00000178568 132 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm37097-201ENSMUST00000193676 336 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.04□□□□□ -1.92
Trim39Q9ESN2 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.04□□□□□ -1.92
Trim39Q9ESN2 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm22306-201ENSMUST00000082692 107 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm22683-201ENSMUST00000082854 137 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim39Q9ESN2 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim39Q9ESN2 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Gm23530-201ENSMUST00000104564 137 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Mir1198-201ENSMUST00000116995 121 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Gm11253-201ENSMUST00000118486 201 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Gm22510-201ENSMUST00000179304 79 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Gm26336-201ENSMUST00000179449 79 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Gm26390-201ENSMUST00000179628 79 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Mir6975-201ENSMUST00000184879 61 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Snord35b-201ENSMUST00000082833 87 ntBASIC3.03□□□□□ -1.92
Trim39Q9ESN2 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Trim39Q9ESN2 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
Trim39Q9ESN2 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Gm26074-201ENSMUST00000104063 129 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Gm6954-201ENSMUST00000117416 225 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Gm22163-201ENSMUST00000158408 135 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Gm23113-201ENSMUST00000158477 99 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Gm21007-201ENSMUST00000221024 326 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Mir9-2-201ENSMUST00000083490 72 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.02□□□□□ -1.93
Trim39Q9ESN2 Gm24581-201ENSMUST00000103962 133 ntBASIC3.01□□□□□ -1.93
Trim39Q9ESN2 Gm24936-201ENSMUST00000122598 247 ntBASIC3.01□□□□□ -1.93
Trim39Q9ESN2 Gm24632-201ENSMUST00000122770 323 ntBASIC3.01□□□□□ -1.93
Trim39Q9ESN2 Gm24559-201ENSMUST00000157519 121 ntBASIC3.01□□□□□ -1.93
Trim39Q9ESN2 Gm25519-201ENSMUST00000158392 127 ntBASIC3.01□□□□□ -1.93
Trim39Q9ESN2 Gm25364-201ENSMUST00000158851 107 ntBASIC3.01□□□□□ -1.93
Trim39Q9ESN2 Gm23925-201ENSMUST00000082471 132 ntBASIC3.01□□□□□ -1.93
Trim39Q9ESN2 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Trim39Q9ESN2 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim39Q9ESN2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.01□□□□□ -1.93
Trim39Q9ESN2 BC022960-201ENSMUST00000119987 1815 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Gm42675-201ENSMUST00000197552 4035 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Gm13076-201ENSMUST00000118041 204 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Gm14709-201ENSMUST00000121225 304 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Gm11414-201ENSMUST00000121795 263 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim39Q9ESN2 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim39Q9ESN2 Snord11-201ENSMUST00000158468 84 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Trim39Q9ESN2 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3□□□□□ -1.93
Trim39Q9ESN2 n-R5s85-201ENSMUST00000083453 113 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Mir101b-201ENSMUST00000083622 97 ntBASIC3□□□□□ -1.93
Trim39Q9ESN2 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim39Q9ESN2 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 189.5 ms