Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.43□□□□□ -2.18
Scn4aQ9ER60 Mir873a-201ENSMUST00000104863 77 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm42606-201ENSMUST00000114209 239 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm25970-201ENSMUST00000157165 86 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 U6.1-201ENSMUST00000157443 101 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm25371-201ENSMUST00000158162 101 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm24222-201ENSMUST00000158834 93 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm25035-201ENSMUST00000175414 77 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm28995-201ENSMUST00000186625 261 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm28927-201ENSMUST00000191528 272 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm43583-201ENSMUST00000199235 303 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm30155-201ENSMUST00000223458 339 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm22980-201ENSMUST00000082608 70 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Mir141-201ENSMUST00000083540 72 ntBASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
Scn4aQ9ER60 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Mir1b-201ENSMUST00000117012 122 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm25805-201ENSMUST00000122788 108 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm23466-201ENSMUST00000157133 106 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm23793-201ENSMUST00000179396 117 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm29661-201ENSMUST00000186781 315 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm28453-203ENSMUST00000187041 189 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm29308-201ENSMUST00000188863 315 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm23412-201ENSMUST00000083017 107 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm24043-201ENSMUST00000083108 116 ntBASIC1.41□□□□□ -2.18
Scn4aQ9ER60 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Scn4aQ9ER60 Gm22048-201ENSMUST00000104721 89 ntBASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Gm14803-201ENSMUST00000117163 361 ntBASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Gm24851-201ENSMUST00000158028 103 ntBASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Gm22447-201ENSMUST00000158155 92 ntBASIC1.4□□□□□ -2.18
Scn4aQ9ER60 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Gm24510-201ENSMUST00000174965 94 ntBASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Mir7683-201ENSMUST00000183842 61 ntBASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Gm9227-201ENSMUST00000194733 566 ntBASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Gm23731-201ENSMUST00000083749 107 ntBASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Scn4aQ9ER60 Gm14674-201ENSMUST00000117816 342 ntBASIC1.4□□□□□ -2.19
Scn4aQ9ER60 Gm15692-201ENSMUST00000152173 352 ntBASIC1.4□□□□□ -2.19
Scn4aQ9ER60 Gm26194-201ENSMUST00000175036 71 ntBASIC1.4□□□□□ -2.19
Scn4aQ9ER60 Gm23090-201ENSMUST00000177331 78 ntBASIC1.4□□□□□ -2.19
Scn4aQ9ER60 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Scn4aQ9ER60 Gm23836-201ENSMUST00000104434 129 ntBASIC1.39□□□□□ -2.19
Scn4aQ9ER60 Gm25054-201ENSMUST00000157370 97 ntBASIC1.39□□□□□ -2.19
Scn4aQ9ER60 Gm26180-201ENSMUST00000179942 107 ntBASIC1.39□□□□□ -2.19
Scn4aQ9ER60 Gm27511-201ENSMUST00000183502 127 ntBASIC1.39□□□□□ -2.19
Scn4aQ9ER60 Gm27317-201ENSMUST00000183533 95 ntBASIC1.39□□□□□ -2.19
Scn4aQ9ER60 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Scn4aQ9ER60 Gm25929-201ENSMUST00000082784 107 ntBASIC1.39□□□□□ -2.19
Scn4aQ9ER60 Rny3-201ENSMUST00000083011 102 ntBASIC1.39□□□□□ -2.19
Scn4aQ9ER60 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm16358-201ENSMUST00000146046 210 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm24915-201ENSMUST00000157288 78 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm22217-201ENSMUST00000157556 313 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm26405-201ENSMUST00000158495 100 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm43238-201ENSMUST00000196463 359 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm23148-201ENSMUST00000180367 107 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm27419-201ENSMUST00000184576 109 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm44149-201ENSMUST00000204256 226 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm25258-201ENSMUST00000083049 107 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Snora3-201ENSMUST00000083082 132 ntBASIC1.38□□□□□ -2.19
Scn4aQ9ER60 Gm11606-201ENSMUST00000120706 617 ntBASIC1.37□□□□□ -2.19
Scn4aQ9ER60 Gm23605-201ENSMUST00000157255 127 ntBASIC1.37□□□□□ -2.19
Scn4aQ9ER60 Gm26400-201ENSMUST00000175012 85 ntBASIC1.37□□□□□ -2.19
Scn4aQ9ER60 Gm29037-201ENSMUST00000189092 313 ntBASIC1.37□□□□□ -2.19
Scn4aQ9ER60 Gm23370-201ENSMUST00000199545 130 ntBASIC1.37□□□□□ -2.19
Scn4aQ9ER60 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.37□□□□□ -2.19
Scn4aQ9ER60 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.37□□□□□ -2.19
Scn4aQ9ER60 Gm23994-201ENSMUST00000158059 88 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm2962-201ENSMUST00000159266 336 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm24920-201ENSMUST00000083018 85 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm26314-201ENSMUST00000083891 107 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm25937-201ENSMUST00000083912 107 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm23142-201ENSMUST00000101848 105 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm26240-201ENSMUST00000101893 105 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm14574-201ENSMUST00000120644 279 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm27845-201ENSMUST00000184479 114 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm28862-201ENSMUST00000188246 163 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm26329-201ENSMUST00000093723 110 ntBASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Scn4aQ9ER60 Gm12647-201ENSMUST00000118977 265 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Gm24277-201ENSMUST00000158661 104 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Gm24668-201ENSMUST00000158935 104 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Gm20477-201ENSMUST00000174028 280 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Mir7093-201ENSMUST00000184195 101 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Gm44483-201ENSMUST00000197203 97 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Gm35736-201ENSMUST00000203681 313 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Gm44960-201ENSMUST00000207403 141 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 223.4 ms