Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm24638-201ENSMUST00000179807 132 ntBASIC2.26□□□□□ -2.05
Nkx2-4Q9EQM3 Gm42834-201ENSMUST00000196845 256 ntBASIC2.26□□□□□ -2.05
Nkx2-4Q9EQM3 Gm44563-201ENSMUST00000207958 178 ntBASIC2.26□□□□□ -2.05
Nkx2-4Q9EQM3 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.26□□□□□ -2.05
Nkx2-4Q9EQM3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm26135-201ENSMUST00000101993 72 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm12512-201ENSMUST00000119620 217 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm11204-201ENSMUST00000122438 147 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm24598-201ENSMUST00000122510 74 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm23545-201ENSMUST00000158205 104 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Snord50b-201ENSMUST00000178497 72 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm27803-201ENSMUST00000183763 119 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Mir6376-201ENSMUST00000185149 131 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Gm22744-201ENSMUST00000083444 65 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.25□□□□□ -2.05
Nkx2-4Q9EQM3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm22151-201ENSMUST00000116963 58 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm2830-201ENSMUST00000140330 385 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm23858-201ENSMUST00000158384 106 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm25015-201ENSMUST00000158400 128 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm26406-201ENSMUST00000158503 124 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Mir6481-201ENSMUST00000184617 110 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm44352-201ENSMUST00000196358 110 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm26225-201ENSMUST00000082508 135 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm26493-201ENSMUST00000083155 136 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Gm22169-201ENSMUST00000083229 107 ntBASIC2.24□□□□□ -2.05
Nkx2-4Q9EQM3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Snord19-201ENSMUST00000104609 76 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Mir466h-201ENSMUST00000104748 81 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm25783-201ENSMUST00000122525 190 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm25961-201ENSMUST00000157174 135 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm24440-201ENSMUST00000157236 63 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm26004-201ENSMUST00000158804 116 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm16326-201ENSMUST00000162843 414 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm17052-201ENSMUST00000165496 289 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm24512-201ENSMUST00000174963 65 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm43563-201ENSMUST00000196761 198 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm42807-201ENSMUST00000200141 329 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm24457-201ENSMUST00000083196 105 ntBASIC2.23□□□□□ -2.05
Nkx2-4Q9EQM3 Gm24098-201ENSMUST00000102075 109 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm25381-201ENSMUST00000102078 109 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm26026-201ENSMUST00000122726 123 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Mir1967-201ENSMUST00000157789 82 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm24237-201ENSMUST00000157790 132 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm23223-201ENSMUST00000158119 127 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm17161-201ENSMUST00000169187 524 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm17113-201ENSMUST00000170118 171 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm29014-201ENSMUST00000191422 326 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm26922-201ENSMUST00000082687 72 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Snora19-201ENSMUST00000082962 132 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Gm23658-201ENSMUST00000083233 132 ntBASIC2.22□□□□□ -2.05
Nkx2-4Q9EQM3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Gm24049-201ENSMUST00000102409 100 ntBASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Gm22149-201ENSMUST00000104442 136 ntBASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Gm24379-201ENSMUST00000122695 86 ntBASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Gm24076-201ENSMUST00000158179 94 ntBASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Gm26175-201ENSMUST00000083794 131 ntBASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Snora33-201ENSMUST00000093556 129 ntBASIC2.21□□□□□ -2.06
Nkx2-4Q9EQM3 Mir301b-201ENSMUST00000102333 97 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm26279-201ENSMUST00000157095 102 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm23324-201ENSMUST00000157421 131 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm25460-201ENSMUST00000157954 127 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm45386-201ENSMUST00000210194 218 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm6109-201ENSMUST00000223297 348 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm22248-201ENSMUST00000082482 150 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm24615-201ENSMUST00000083268 113 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Mir29c-201ENSMUST00000083614 88 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm10360-201ENSMUST00000097219 272 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.2□□□□□ -2.06
Nkx2-4Q9EQM3 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Nkx2-4Q9EQM3 Gm23015-201ENSMUST00000104145 128 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms