Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm15861-201ENSMUST00000120979 339 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Gm13433-201ENSMUST00000121701 240 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Gm28912-201ENSMUST00000189001 234 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Gm37089-201ENSMUST00000195616 129 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Gm25204-201ENSMUST00000082843 106 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Gm25141-201ENSMUST00000083177 107 ntBASIC1.84□□□□□ -2.11
Cstf3Q99LI7 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Cstf3Q99LI7 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm15067-201ENSMUST00000119534 156 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm25664-201ENSMUST00000157697 107 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm26287-201ENSMUST00000158887 81 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm25615-201ENSMUST00000177836 94 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Mir6901-201ENSMUST00000185062 62 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm28921-201ENSMUST00000190219 378 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm22248-201ENSMUST00000082482 150 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm24151-201ENSMUST00000082758 141 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cstf3Q99LI7 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm24423-201ENSMUST00000101982 106 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm26077-201ENSMUST00000104064 123 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm24984-201ENSMUST00000104454 133 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm14709-201ENSMUST00000121225 304 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm14491-201ENSMUST00000121919 199 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm23172-201ENSMUST00000157160 124 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm21885-201ENSMUST00000178891 327 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm5900-201ENSMUST00000179862 375 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm26864-201ENSMUST00000181346 156 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Mir6379-201ENSMUST00000183392 115 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Mir6540-201ENSMUST00000184886 108 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm37693-201ENSMUST00000194562 234 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm44353-201ENSMUST00000200618 138 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm5010-201ENSMUST00000213131 260 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Gm24042-201ENSMUST00000083114 103 ntBASIC1.82□□□□□ -2.12
Cstf3Q99LI7 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm22227-201ENSMUST00000157356 259 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 U6.1-201ENSMUST00000157443 101 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm25914-201ENSMUST00000157618 153 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm25024-201ENSMUST00000179667 104 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm27545-201ENSMUST00000184755 202 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm27544-201ENSMUST00000185069 155 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm23370-201ENSMUST00000199545 130 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Cstf3Q99LI7 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm22358-201ENSMUST00000082877 122 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm25513-201ENSMUST00000083861 162 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm25188-201ENSMUST00000083913 122 ntBASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Cstf3Q99LI7 Gm22784-201ENSMUST00000104088 132 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Gm14937-201ENSMUST00000119709 208 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Gm23656-201ENSMUST00000122626 112 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Gm22097-201ENSMUST00000157929 278 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Mir1951-201ENSMUST00000157981 89 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Gm25051-201ENSMUST00000158602 249 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Gm26022-201ENSMUST00000158663 108 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Mir7683-201ENSMUST00000183842 61 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Mir7062-201ENSMUST00000185038 66 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.8□□□□□ -2.12
Cstf3Q99LI7 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Snora3-201ENSMUST00000083082 132 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Gm10360-201ENSMUST00000097219 272 ntBASIC1.8□□□□□ -2.12
Cstf3Q99LI7 Mir3096-201ENSMUST00000116685 71 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Gm24590-201ENSMUST00000116699 119 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Gm25643-201ENSMUST00000158874 103 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Gm24668-201ENSMUST00000158935 104 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Gm27511-201ENSMUST00000183502 127 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Gm28724-201ENSMUST00000186149 625 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Mir7021-201ENSMUST00000197026 63 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.79□□□□□ -2.12
Cstf3Q99LI7 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Gm25357-201ENSMUST00000082745 72 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Mir155-201ENSMUST00000083463 65 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Mir322-201ENSMUST00000083484 95 ntBASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Cstf3Q99LI7 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm24392-201ENSMUST00000158136 103 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm22666-201ENSMUST00000158717 164 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm24667-201ENSMUST00000158938 103 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm22264-201ENSMUST00000178200 107 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm25235-201ENSMUST00000179933 107 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Mir6419-201ENSMUST00000184784 113 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm27959-201ENSMUST00000185172 111 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm29308-201ENSMUST00000188863 315 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm29657-201ENSMUST00000189807 342 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.78□□□□□ -2.12
Cstf3Q99LI7 Gm24805-201ENSMUST00000082931 104 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms