Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Ndc1Q8VCB1 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Mir669b-201ENSMUST00000102172 97 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Mir1195-201ENSMUST00000116818 98 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Gm16171-201ENSMUST00000118004 324 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Gm23337-201ENSMUST00000158959 118 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Gm6788-201ENSMUST00000166459 270 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Gm43587-201ENSMUST00000199590 204 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Ndc1Q8VCB1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Mir344c-201ENSMUST00000103919 92 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Gm25526-201ENSMUST00000104332 132 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Gm14602-201ENSMUST00000118625 340 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Gm25491-201ENSMUST00000158733 308 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Gm44326-201ENSMUST00000198226 101 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Gm44478-201ENSMUST00000204875 114 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Gm25130-201ENSMUST00000082650 156 ntBASIC2.61□□□□□ -1.99
Ndc1Q8VCB1 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm23128-201ENSMUST00000104257 132 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm25879-201ENSMUST00000104330 107 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm22850-201ENSMUST00000157714 82 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm24813-201ENSMUST00000175310 84 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm28647-201ENSMUST00000188416 197 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm23128-202ENSMUST00000196578 133 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm18546-201ENSMUST00000197245 676 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm35736-201ENSMUST00000203681 313 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Gm23947-201ENSMUST00000093636 107 ntBASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ndc1Q8VCB1 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 DQ267100-201ENSMUST00000122600 72 ntBASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 Gm24443-201ENSMUST00000157242 132 ntBASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 Gm27379-201ENSMUST00000183730 123 ntBASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 Gm27527-201ENSMUST00000183903 99 ntBASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 Gm37007-201ENSMUST00000194234 319 ntBASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 Gm45452-201ENSMUST00000210905 177 ntBASIC2.59□□□□□ -1.99
Ndc1Q8VCB1 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.59□□□□□ -2
Ndc1Q8VCB1 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
Ndc1Q8VCB1 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.59□□□□□ -2
Ndc1Q8VCB1 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ndc1Q8VCB1 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ndc1Q8VCB1 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm8260-201ENSMUST00000119230 353 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm15272-201ENSMUST00000120865 233 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm24736-201ENSMUST00000158862 130 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm25470-201ENSMUST00000175576 111 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Snord93-201ENSMUST00000175580 71 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm27991-201ENSMUST00000184804 137 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm28169-201ENSMUST00000190342 345 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.58□□□□□ -2
Ndc1Q8VCB1 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Ndc1Q8VCB1 Mir155-201ENSMUST00000083463 65 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm26175-201ENSMUST00000083794 131 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm10172-201ENSMUST00000085929 558 ntBASIC2.58□□□□□ -2
Ndc1Q8VCB1 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ndc1Q8VCB1 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ndc1Q8VCB1 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ndc1Q8VCB1 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ndc1Q8VCB1 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ndc1Q8VCB1 Gm24122-201ENSMUST00000104107 132 ntBASIC2.57□□□□□ -2
Ndc1Q8VCB1 Gm26247-201ENSMUST00000116702 91 ntBASIC2.57□□□□□ -2
Ndc1Q8VCB1 Gm25825-201ENSMUST00000157091 124 ntBASIC2.57□□□□□ -2
Ndc1Q8VCB1 Gm25153-201ENSMUST00000157118 156 ntBASIC2.57□□□□□ -2
Ndc1Q8VCB1 Gm25711-201ENSMUST00000158633 128 ntBASIC2.57□□□□□ -2
Ndc1Q8VCB1 Mir7242-201ENSMUST00000183710 79 ntBASIC2.57□□□□□ -2
Ndc1Q8VCB1 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.57□□□□□ -2
Ndc1Q8VCB1 Gm22828-201ENSMUST00000083768 107 ntBASIC2.57□□□□□ -2
Ndc1Q8VCB1 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ndc1Q8VCB1 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Gm26099-201ENSMUST00000157248 109 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Gm24304-201ENSMUST00000177635 107 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Gm28409-201ENSMUST00000187064 103 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Gm44491-201ENSMUST00000196794 96 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.56□□□□□ -2
Ndc1Q8VCB1 Gm44966-201ENSMUST00000208096 157 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.56□□□□□ -2
Ndc1Q8VCB1 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Gm22154-201ENSMUST00000083844 131 ntBASIC2.56□□□□□ -2
Ndc1Q8VCB1 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ndc1Q8VCB1 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms