Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm24625-201ENSMUST00000082622 130 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm23060-201ENSMUST00000102345 109 ntBASIC2.74□□□□□ -1.97
Ushbp1Q8R370 Gm12143-201ENSMUST00000119666 332 ntBASIC2.74□□□□□ -1.97
Ushbp1Q8R370 Gm22281-201ENSMUST00000157198 103 ntBASIC2.74□□□□□ -1.97
Ushbp1Q8R370 Gm5002-201ENSMUST00000207145 223 ntBASIC2.74□□□□□ -1.97
Ushbp1Q8R370 Gm8031-201ENSMUST00000213430 626 ntBASIC2.74□□□□□ -1.97
Ushbp1Q8R370 AC158982.2-201ENSMUST00000226283 184 ntBASIC2.74□□□□□ -1.97
Ushbp1Q8R370 Mir302d-201ENSMUST00000083513 66 ntBASIC2.74□□□□□ -1.97
Ushbp1Q8R370 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.74□□□□□ -1.97
Ushbp1Q8R370 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ushbp1Q8R370 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Gm22193-201ENSMUST00000116868 76 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Gm13797-201ENSMUST00000121792 120 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Gm23980-201ENSMUST00000157135 158 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Mir6353-201ENSMUST00000183596 113 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Gm38183-201ENSMUST00000193189 205 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Gm43676-201ENSMUST00000197532 540 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Mir7215-201ENSMUST00000200383 51 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Gm22704-201ENSMUST00000083027 137 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.73□□□□□ -1.97
Ushbp1Q8R370 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Gm25494-201ENSMUST00000158143 100 ntBASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Gm3852-201ENSMUST00000182781 264 ntBASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Gm43626-201ENSMUST00000198575 162 ntBASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Gm42807-201ENSMUST00000200141 329 ntBASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Gm22248-201ENSMUST00000082482 150 ntBASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Gm22421-201ENSMUST00000083058 107 ntBASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Ushbp1Q8R370 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm14748-201ENSMUST00000119819 411 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm24475-201ENSMUST00000157435 143 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm23670-201ENSMUST00000157469 119 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm24106-201ENSMUST00000175498 127 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm44477-201ENSMUST00000199661 110 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm11351-202ENSMUST00000225724 478 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm24977-201ENSMUST00000083106 163 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.71□□□□□ -1.98
Ushbp1Q8R370 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ushbp1Q8R370 Gm13345-201ENSMUST00000121928 228 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Gm25113-201ENSMUST00000157185 143 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Gm24015-201ENSMUST00000157725 232 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Gm24001-201ENSMUST00000158463 85 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Gm17161-201ENSMUST00000169187 524 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Gm25124-201ENSMUST00000083345 164 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Mir29c-201ENSMUST00000083614 88 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.7□□□□□ -1.98
Ushbp1Q8R370 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm22752-201ENSMUST00000102083 109 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm25961-201ENSMUST00000157174 135 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm26412-201ENSMUST00000157666 55 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Mir6376-201ENSMUST00000185149 131 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm34139-201ENSMUST00000196166 294 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm33866-201ENSMUST00000196911 289 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm44385-201ENSMUST00000198781 81 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm44482-201ENSMUST00000199232 103 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm45445-201ENSMUST00000209586 232 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm46993-201ENSMUST00000220708 259 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm25634-201ENSMUST00000082667 105 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm25204-201ENSMUST00000082843 106 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Gm22972-201ENSMUST00000083297 131 ntBASIC2.69□□□□□ -1.98
Ushbp1Q8R370 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm26135-201ENSMUST00000101993 72 ntBASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm25377-201ENSMUST00000104334 129 ntBASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm23048-201ENSMUST00000157237 129 ntBASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm26482-201ENSMUST00000158015 62 ntBASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Snord50b-201ENSMUST00000178497 72 ntBASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm25130-201ENSMUST00000082650 156 ntBASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm25813-201ENSMUST00000082748 191 ntBASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm26175-201ENSMUST00000083794 131 ntBASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.68□□□□□ -1.98
Ushbp1Q8R370 Gm22486-201ENSMUST00000116815 137 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Gm23990-201ENSMUST00000117031 117 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Gm23858-201ENSMUST00000158384 106 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Gm24771-201ENSMUST00000158508 137 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Mir7017-201ENSMUST00000184894 62 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Mir7226-201ENSMUST00000184953 60 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Gm45116-201ENSMUST00000207392 275 ntBASIC2.67□□□□□ -1.98
Ushbp1Q8R370 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms