Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm22767-201ENSMUST00000158365 165 ntBASIC2.63□□□□□ -1.99
Vps53Q8CCB4 Gm25051-201ENSMUST00000158602 249 ntBASIC2.63□□□□□ -1.99
Vps53Q8CCB4 Gm17113-201ENSMUST00000170118 171 ntBASIC2.63□□□□□ -1.99
Vps53Q8CCB4 Gm23571-201ENSMUST00000180073 127 ntBASIC2.63□□□□□ -1.99
Vps53Q8CCB4 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.63□□□□□ -1.99
Vps53Q8CCB4 Mir384-201ENSMUST00000083565 88 ntBASIC2.63□□□□□ -1.99
Vps53Q8CCB4 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.63□□□□□ -1.99
Vps53Q8CCB4 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm25094-201ENSMUST00000103992 131 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm12941-201ENSMUST00000117934 220 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm24896-201ENSMUST00000122741 135 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm23048-201ENSMUST00000157237 129 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm25424-201ENSMUST00000157612 58 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm23584-201ENSMUST00000157655 129 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Snord11-201ENSMUST00000158468 84 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Mir6997-201ENSMUST00000184313 71 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm37997-201ENSMUST00000193515 267 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Gm43676-201ENSMUST00000197532 540 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Vps53Q8CCB4 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Mir466p-201ENSMUST00000103925 89 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Gm22151-201ENSMUST00000116963 58 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Gm24440-201ENSMUST00000157236 63 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Gm24769-201ENSMUST00000158506 129 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Gm22947-201ENSMUST00000158559 91 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Gm23548-201ENSMUST00000158963 106 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Gm24512-201ENSMUST00000174963 65 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Gm25933-201ENSMUST00000178943 108 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Mir1291-201ENSMUST00000199842 117 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Gm24977-201ENSMUST00000083106 163 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Snora34-201ENSMUST00000083402 138 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Mir146-201ENSMUST00000083667 65 ntBASIC2.61□□□□□ -1.99
Vps53Q8CCB4 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Gm13885-201ENSMUST00000117569 187 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Gm26280-201ENSMUST00000157096 101 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Gm22803-201ENSMUST00000158049 283 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Gm37557-201ENSMUST00000191640 139 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Gm11351-202ENSMUST00000225724 478 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Gm22248-201ENSMUST00000082482 150 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Gm24661-201ENSMUST00000083205 104 ntBASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Vps53Q8CCB4 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm26154-201ENSMUST00000102339 96 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm26077-201ENSMUST00000104064 123 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm13913-201ENSMUST00000121126 260 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm23381-201ENSMUST00000157676 94 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm22337-201ENSMUST00000157721 132 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Mir1927-201ENSMUST00000158579 109 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm25488-201ENSMUST00000158728 118 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm24304-201ENSMUST00000177635 107 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Mir497-201ENSMUST00000200557 84 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm18188-201ENSMUST00000219386 478 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm24313-201ENSMUST00000082561 133 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm23678-201ENSMUST00000083157 107 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm22972-201ENSMUST00000083297 131 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.59□□□□□ -1.99
Vps53Q8CCB4 Gm13797-201ENSMUST00000121792 120 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm25910-201ENSMUST00000157620 140 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm25888-201ENSMUST00000157778 302 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm22989-201ENSMUST00000158313 86 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm17161-201ENSMUST00000169187 524 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm37624-201ENSMUST00000193751 219 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm43512-201ENSMUST00000198495 176 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm19790-201ENSMUST00000214414 251 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm25796-201ENSMUST00000082645 163 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.58□□□□□ -2
Vps53Q8CCB4 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm23950-201ENSMUST00000104026 129 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm14491-201ENSMUST00000121919 199 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm16355-201ENSMUST00000128606 231 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm22483-201ENSMUST00000157986 274 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm25494-201ENSMUST00000158143 100 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm22286-201ENSMUST00000179708 107 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm27285-201ENSMUST00000183875 127 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm44564-201ENSMUST00000207985 180 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Gm19118-201ENSMUST00000222554 98 ntBASIC2.57□□□□□ -2
Vps53Q8CCB4 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms