Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm27374-201ENSMUST00000183660 81 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Gm23747-201ENSMUST00000104228 131 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Gm24280-201ENSMUST00000104237 134 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Gm25728-201ENSMUST00000104525 159 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Mir291a-201ENSMUST00000104815 82 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Gm23886-201ENSMUST00000122684 313 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Mir6917-201ENSMUST00000184111 61 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Mir7k-201ENSMUST00000184115 110 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Gm44057-201ENSMUST00000204547 96 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Gm22283-201ENSMUST00000082556 161 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim47Q8C0E3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim47Q8C0E3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm22935-201ENSMUST00000103960 104 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm24480-201ENSMUST00000157442 103 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm23349-201ENSMUST00000158432 98 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm24878-201ENSMUST00000158782 104 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm22800-201ENSMUST00000175627 94 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm26435-201ENSMUST00000179026 107 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm22638-201ENSMUST00000179674 107 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm27921-201ENSMUST00000183968 108 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Gm6801-201ENSMUST00000190697 339 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 AC136457.1-201ENSMUST00000224195 156 ntBASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim47Q8C0E3 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
Trim47Q8C0E3 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trim47Q8C0E3 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Gm23601-201ENSMUST00000157259 131 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Gm24913-201ENSMUST00000157286 107 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Gm24138-201ENSMUST00000157572 114 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Gm23223-201ENSMUST00000158119 127 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Mir6350-201ENSMUST00000183639 105 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Mir7081-201ENSMUST00000184490 75 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Gm43932-201ENSMUST00000204499 52 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Mir489-201ENSMUST00000093599 107 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.65□□□□□ -1.83
Trim47Q8C0E3 Gm25407-201ENSMUST00000104102 134 ntBASIC3.64□□□□□ -1.83
Trim47Q8C0E3 Gm23237-201ENSMUST00000104639 92 ntBASIC3.64□□□□□ -1.83
Trim47Q8C0E3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trim47Q8C0E3 Gm20058-201ENSMUST00000186939 284 ntBASIC3.64□□□□□ -1.83
Trim47Q8C0E3 AC124687.1-201ENSMUST00000221868 189 ntBASIC3.64□□□□□ -1.83
Trim47Q8C0E3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim47Q8C0E3 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.64□□□□□ -1.83
Trim47Q8C0E3 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim47Q8C0E3 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Gm23324-201ENSMUST00000157421 131 ntBASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Gm22532-201ENSMUST00000158822 140 ntBASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Gm24816-201ENSMUST00000175311 151 ntBASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Gm37085-201ENSMUST00000193780 196 ntBASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Gm24261-201ENSMUST00000083744 104 ntBASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC3.63□□□□□ -1.83
Trim47Q8C0E3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trim47Q8C0E3 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.62□□□□□ -1.83
Trim47Q8C0E3 Gm23043-201ENSMUST00000157890 109 ntBASIC3.62□□□□□ -1.83
Trim47Q8C0E3 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.62□□□□□ -1.83
Trim47Q8C0E3 Gm19563-201ENSMUST00000222031 270 ntBASIC3.62□□□□□ -1.83
Trim47Q8C0E3 mt-Ts2-201ENSMUST00000082416 59 ntBASIC3.62□□□□□ -1.83
Trim47Q8C0E3 Gm25856-201ENSMUST00000082786 75 ntBASIC3.62□□□□□ -1.83
Trim47Q8C0E3 Snora70-201ENSMUST00000083047 137 ntBASIC3.62□□□□□ -1.83
Trim47Q8C0E3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Trim47Q8C0E3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim47Q8C0E3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Gm22545-201ENSMUST00000104350 132 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Gm14674-201ENSMUST00000117816 342 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Gm22770-201ENSMUST00000158368 67 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Gm23933-201ENSMUST00000178405 79 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Gm26864-201ENSMUST00000181346 156 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Mir7014-201ENSMUST00000183853 63 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Gm6030-201ENSMUST00000078768 402 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Gm22154-201ENSMUST00000083844 131 ntBASIC3.61□□□□□ -1.83
Trim47Q8C0E3 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Gm26423-201ENSMUST00000104277 128 ntBASIC3.6□□□□□ -1.83
Trim47Q8C0E3 Gm25490-201ENSMUST00000158734 130 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms