Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm22521-201ENSMUST00000158272 134 ntBASIC4.34□□□□□ -1.71
Trim35Q8C006 Gm37290-201ENSMUST00000195775 339 ntBASIC4.34□□□□□ -1.71
Trim35Q8C006 Gm44389-201ENSMUST00000203795 182 ntBASIC4.34□□□□□ -1.71
Trim35Q8C006 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.34□□□□□ -1.71
Trim35Q8C006 Gm25124-201ENSMUST00000083345 164 ntBASIC4.34□□□□□ -1.71
Trim35Q8C006 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Trim35Q8C006 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.34□□□□□ -1.72
Trim35Q8C006 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Trim35Q8C006 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Trim35Q8C006 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Trim35Q8C006 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim35Q8C006 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm24125-201ENSMUST00000104105 137 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm25726-201ENSMUST00000104529 129 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm16250-201ENSMUST00000148974 256 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm25913-201ENSMUST00000157617 135 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm25014-201ENSMUST00000158401 103 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm6788-201ENSMUST00000166459 270 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim35Q8C006 Mir6391-201ENSMUST00000184391 104 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm43586-201ENSMUST00000195948 310 ntBASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.33□□□□□ -1.72
Trim35Q8C006 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim35Q8C006 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.32□□□□□ -1.72
Trim35Q8C006 Gm25884-201ENSMUST00000157782 62 ntBASIC4.32□□□□□ -1.72
Trim35Q8C006 Gm22395-201ENSMUST00000177427 96 ntBASIC4.32□□□□□ -1.72
Trim35Q8C006 Gm22108-201ENSMUST00000177961 106 ntBASIC4.32□□□□□ -1.72
Trim35Q8C006 Gm24798-201ENSMUST00000179334 106 ntBASIC4.32□□□□□ -1.72
Trim35Q8C006 Mir7074-201ENSMUST00000183884 63 ntBASIC4.32□□□□□ -1.72
Trim35Q8C006 Mir5121-201ENSMUST00000198528 74 ntBASIC4.32□□□□□ -1.72
Trim35Q8C006 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim35Q8C006 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim35Q8C006 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Trim35Q8C006 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim35Q8C006 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm25611-201ENSMUST00000104017 133 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm24982-201ENSMUST00000104456 132 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm10552-201ENSMUST00000113396 372 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm14448-201ENSMUST00000116383 210 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm24399-201ENSMUST00000157869 74 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim35Q8C006 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm27330-201ENSMUST00000184689 132 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.31□□□□□ -1.72
Trim35Q8C006 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm24536-201ENSMUST00000083144 107 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Gm38706-201ENSMUST00000182397 2617 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 AC132221.1-201ENSMUST00000220577 3841 ntBASIC4.31□□□□□ -1.72
Trim35Q8C006 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.3□□□□□ -1.72
Trim35Q8C006 Mir761-201ENSMUST00000103245 76 ntBASIC4.3□□□□□ -1.72
Trim35Q8C006 Gm13737-201ENSMUST00000119793 232 ntBASIC4.3□□□□□ -1.72
Trim35Q8C006 Gm13862-201ENSMUST00000121220 197 ntBASIC4.3□□□□□ -1.72
Trim35Q8C006 Rnu7-201ENSMUST00000158458 62 ntBASIC4.3□□□□□ -1.72
Trim35Q8C006 Mir5136-201ENSMUST00000175573 76 ntBASIC4.3□□□□□ -1.72
Trim35Q8C006 Gm25697-201ENSMUST00000082902 98 ntBASIC4.3□□□□□ -1.72
Trim35Q8C006 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim35Q8C006 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC4.3□□□□□ -1.72
Trim35Q8C006 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim35Q8C006 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim35Q8C006 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim35Q8C006 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim35Q8C006 Gm25992-201ENSMUST00000102437 109 ntBASIC4.29□□□□□ -1.72
Trim35Q8C006 Gm13249-201ENSMUST00000177803 345 ntBASIC4.29□□□□□ -1.72
Trim35Q8C006 Gm13144-201ENSMUST00000179385 345 ntBASIC4.29□□□□□ -1.72
Trim35Q8C006 Gm27940-201ENSMUST00000184449 98 ntBASIC4.29□□□□□ -1.72
Trim35Q8C006 Gm44887-201ENSMUST00000208980 178 ntBASIC4.29□□□□□ -1.72
Trim35Q8C006 Gm23875-201ENSMUST00000083711 318 ntBASIC4.29□□□□□ -1.72
Trim35Q8C006 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim35Q8C006 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim35Q8C006 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim35Q8C006 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Trim35Q8C006 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim35Q8C006 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm23950-201ENSMUST00000104026 129 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm26367-201ENSMUST00000104165 132 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm10444-201ENSMUST00000126708 148 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm23638-201ENSMUST00000175073 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm23158-201ENSMUST00000175076 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm22907-201ENSMUST00000175198 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm22625-201ENSMUST00000175382 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm22875-201ENSMUST00000175449 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm25197-201ENSMUST00000175516 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm27857-201ENSMUST00000176930 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm26268-201ENSMUST00000177685 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm23681-201ENSMUST00000178821 126 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm38356-201ENSMUST00000194313 408 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm19366-201ENSMUST00000206996 156 ntBASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim35Q8C006 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim35Q8C006 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim35Q8C006 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
Trim35Q8C006 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim35Q8C006 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim35Q8C006 Snord66-201ENSMUST00000104051 75 ntBASIC4.27□□□□□ -1.73
Trim35Q8C006 Gm12190-201ENSMUST00000120001 187 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms