Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm25651-201ENSMUST00000083782 119 ntBASIC-0.19□□□□□ -2.44
Col16a1Q8BLX7 Gm9059-201ENSMUST00000118319 183 ntBASIC-0.2□□□□□ -2.44
Col16a1Q8BLX7 n-R5s188-201ENSMUST00000122646 105 ntBASIC-0.2□□□□□ -2.44
Col16a1Q8BLX7 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.2□□□□□ -2.44
Col16a1Q8BLX7 Gm22290-201ENSMUST00000177655 107 ntBASIC-0.2□□□□□ -2.44
Col16a1Q8BLX7 Gm27365-201ENSMUST00000184041 177 ntBASIC-0.2□□□□□ -2.44
Col16a1Q8BLX7 Gm23629-201ENSMUST00000082465 107 ntBASIC-0.2□□□□□ -2.44
Col16a1Q8BLX7 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
Col16a1Q8BLX7 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Gm23853-201ENSMUST00000158375 104 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Mir1961-201ENSMUST00000158643 112 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 AC069561.2-201ENSMUST00000217596 420 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC-0.21□□□□□ -2.44
Col16a1Q8BLX7 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Gm24439-201ENSMUST00000157894 117 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Gm25874-201ENSMUST00000178030 79 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Gm28299-201ENSMUST00000189908 339 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Gm19901-201ENSMUST00000192191 495 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Trav5d-2-201ENSMUST00000196107 275 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Trav5n-2-201ENSMUST00000197136 275 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Mir468-201ENSMUST00000197332 78 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Gm22809-201ENSMUST00000082743 156 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Gm23104-201ENSMUST00000083722 104 ntBASIC-0.22□□□□□ -2.44
Col16a1Q8BLX7 Gm26339-201ENSMUST00000102368 99 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm22786-201ENSMUST00000104086 122 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm22545-201ENSMUST00000104350 132 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm23542-201ENSMUST00000158208 96 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm23862-201ENSMUST00000180342 94 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm26265-202ENSMUST00000196326 133 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 AC162910.1-201ENSMUST00000221219 1723 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm15379-201ENSMUST00000121224 648 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm25706-201ENSMUST00000157828 247 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm16539-201ENSMUST00000160086 327 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 AC153141.1-201ENSMUST00000218636 501 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm32300-201ENSMUST00000221735 515 ntBASIC-0.23□□□□□ -2.45
Col16a1Q8BLX7 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.24□□□□□ -2.45
Col16a1Q8BLX7 Gm14417-201ENSMUST00000120036 1074 ntBASIC-0.24□□□□□ -2.45
Col16a1Q8BLX7 Gm25783-201ENSMUST00000122525 190 ntBASIC-0.24□□□□□ -2.45
Col16a1Q8BLX7 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.24□□□□□ -2.45
Col16a1Q8BLX7 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.24□□□□□ -2.45
Col16a1Q8BLX7 Gm29513-201ENSMUST00000185741 202 ntBASIC-0.24□□□□□ -2.45
Col16a1Q8BLX7 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 Gm26249-201ENSMUST00000116708 118 ntBASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 Gm23032-201ENSMUST00000157995 107 ntBASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 Gm23838-201ENSMUST00000158067 162 ntBASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 Gm24168-201ENSMUST00000178825 107 ntBASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 AC164612.2-202ENSMUST00000216314 253 ntBASIC-0.25□□□□□ -2.45
Col16a1Q8BLX7 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 Gm25384-201ENSMUST00000157807 105 ntBASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 Gm25557-201ENSMUST00000158084 315 ntBASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 Gm44909-201ENSMUST00000208756 165 ntBASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 Gm24045-201ENSMUST00000083113 98 ntBASIC-0.26□□□□□ -2.45
Col16a1Q8BLX7 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Gm25884-201ENSMUST00000157782 62 ntBASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Gm16588-201ENSMUST00000162889 355 ntBASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Snord85-201ENSMUST00000083262 73 ntBASIC-0.27□□□□□ -2.45
Col16a1Q8BLX7 Gm16053-201ENSMUST00000120511 188 ntBASIC-0.28□□□□□ -2.45
Col16a1Q8BLX7 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.28□□□□□ -2.45
Col16a1Q8BLX7 Mir500-201ENSMUST00000093600 92 ntBASIC-0.28□□□□□ -2.45
Col16a1Q8BLX7 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.28□□□□□ -2.45
Col16a1Q8BLX7 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.28□□□□□ -2.45
Col16a1Q8BLX7 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.28□□□□□ -2.45
Col16a1Q8BLX7 Gm22279-201ENSMUST00000157200 93 ntBASIC-0.28□□□□□ -2.45
Col16a1Q8BLX7 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Gm14599-201ENSMUST00000120469 474 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Gm24726-201ENSMUST00000158232 121 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Gm27236-201ENSMUST00000184147 442 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Gm28283-201ENSMUST00000185509 178 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Gm25896-201ENSMUST00000083713 136 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.29□□□□□ -2.46
Col16a1Q8BLX7 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.3□□□□□ -2.46
Col16a1Q8BLX7 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms