Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm28169-201ENSMUST00000190342 345 ntBASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 Gm23723-201ENSMUST00000082996 132 ntBASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.15□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm22722-201ENSMUST00000157467 132 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm22382-201ENSMUST00000158185 130 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm22833-201ENSMUST00000158292 132 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm25012-201ENSMUST00000158396 164 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Mir7014-201ENSMUST00000183853 63 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Mir7081-201ENSMUST00000184490 75 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm9370-201ENSMUST00000222787 609 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm26168-201ENSMUST00000083787 112 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.14□□□□□ -1.91
Sh3rf1Q69ZI1 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Gm24246-201ENSMUST00000157315 132 ntBASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Gm44393-201ENSMUST00000197418 138 ntBASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Mir1291-201ENSMUST00000199842 117 ntBASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Gm19563-201ENSMUST00000222031 270 ntBASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Gm16976-205ENSMUST00000227324 226 ntBASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Snora34-201ENSMUST00000083402 138 ntBASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 Gm11356-201ENSMUST00000118974 192 ntBASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 Gm14389-201ENSMUST00000140453 241 ntBASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 Gm22790-201ENSMUST00000157229 129 ntBASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 Gm24718-201ENSMUST00000157521 136 ntBASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 Gm26088-201ENSMUST00000157896 131 ntBASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 CT009696.1-201ENSMUST00000215745 256 ntBASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.12□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm22679-201ENSMUST00000116975 100 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm11285-201ENSMUST00000118443 322 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm12513-201ENSMUST00000118617 352 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm25544-201ENSMUST00000122676 120 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm22800-201ENSMUST00000175627 94 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm23933-201ENSMUST00000178405 79 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm27783-201ENSMUST00000183534 105 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Mir6917-201ENSMUST00000184111 61 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm28358-202ENSMUST00000189292 223 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm37377-201ENSMUST00000191733 304 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Gm44308-201ENSMUST00000197080 99 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.11□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm44489-201ENSMUST00000104619 97 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm25539-201ENSMUST00000116886 122 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm15289-201ENSMUST00000117793 244 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm14502-201ENSMUST00000118154 113 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm25323-201ENSMUST00000122555 103 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm23665-201ENSMUST00000158054 62 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm25678-201ENSMUST00000174984 73 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm27792-201ENSMUST00000184031 115 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Sh3rf1Q69ZI1 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm22071-201ENSMUST00000116857 83 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm14602-201ENSMUST00000118625 340 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm15190-201ENSMUST00000120855 276 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm16021-201ENSMUST00000121176 219 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm12013-201ENSMUST00000121971 155 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm26477-201ENSMUST00000122617 323 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm24480-201ENSMUST00000157442 103 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm22983-201ENSMUST00000158308 104 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Gm27698-201ENSMUST00000184060 249 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.09□□□□□ -1.91
Sh3rf1Q69ZI1 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms