Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm13922-201ENSMUST00000119505 156 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Gm23980-201ENSMUST00000157135 158 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Gm22853-201ENSMUST00000174974 131 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Gm23190-201ENSMUST00000180307 64 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Gm28000-201ENSMUST00000184380 85 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Gm29658-201ENSMUST00000185404 230 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Gm28647-201ENSMUST00000188416 197 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Gm18000-201ENSMUST00000212153 800 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.98□□□□□ -1.93
Trim28Q62318 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim28Q62318 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim28Q62318 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trim28Q62318 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim28Q62318 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim28Q62318 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trim28Q62318 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trim28Q62318 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trim28Q62318 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.97□□□□□ -1.93
Trim28Q62318 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.97□□□□□ -1.93
Trim28Q62318 Gm25961-201ENSMUST00000157174 135 ntBASIC2.97□□□□□ -1.93
Trim28Q62318 Gm22947-201ENSMUST00000158559 91 ntBASIC2.97□□□□□ -1.93
Trim28Q62318 Gm17067-202ENSMUST00000180131 123 ntBASIC2.97□□□□□ -1.93
Trim28Q62318 Gm6060-201ENSMUST00000188671 251 ntBASIC2.97□□□□□ -1.93
Trim28Q62318 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.97□□□□□ -1.93
Trim28Q62318 Gm25409-201ENSMUST00000083764 131 ntBASIC2.97□□□□□ -1.93
Trim28Q62318 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trim28Q62318 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trim28Q62318 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.96□□□□□ -1.94
Trim28Q62318 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.96□□□□□ -1.94
Trim28Q62318 Gm24717-201ENSMUST00000157522 124 ntBASIC2.96□□□□□ -1.94
Trim28Q62318 Gm25364-201ENSMUST00000158851 107 ntBASIC2.96□□□□□ -1.94
Trim28Q62318 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trim28Q62318 Gm38298-201ENSMUST00000193578 118 ntBASIC2.96□□□□□ -1.94
Trim28Q62318 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.96□□□□□ -1.94
Trim28Q62318 Gm22576-201ENSMUST00000083733 104 ntBASIC2.96□□□□□ -1.94
Trim28Q62318 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.95□□□□□ -1.94
Trim28Q62318 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Trim28Q62318 Gm12941-201ENSMUST00000117934 220 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Gm16186-201ENSMUST00000120132 216 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Gm25910-201ENSMUST00000157620 140 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Gm23588-201ENSMUST00000157659 99 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Gm24053-201ENSMUST00000158620 105 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Gm23933-201ENSMUST00000178405 79 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Gm6801-201ENSMUST00000190697 339 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Gm43602-201ENSMUST00000196772 300 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Mir7118-201ENSMUST00000197760 61 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Gm25199-201ENSMUST00000083095 104 ntBASIC2.95□□□□□ -1.94
Trim28Q62318 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim28Q62318 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Trim28Q62318 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trim28Q62318 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Trim28Q62318 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trim28Q62318 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trim28Q62318 Gm24126-201ENSMUST00000104111 106 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm23013-201ENSMUST00000104146 106 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm24283-201ENSMUST00000104233 107 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm24892-201ENSMUST00000122747 104 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm24440-201ENSMUST00000157236 63 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm22666-201ENSMUST00000158717 164 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm22664-201ENSMUST00000158719 105 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm23337-201ENSMUST00000158959 118 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.94□□□□□ -1.94
Trim28Q62318 Gm24512-201ENSMUST00000174963 65 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Mir7014-201ENSMUST00000183853 63 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm42844-201ENSMUST00000200355 112 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm5010-201ENSMUST00000213131 260 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm22681-201ENSMUST00000083853 106 ntBASIC2.94□□□□□ -1.94
Trim28Q62318 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.94□□□□□ -1.94
Trim28Q62318 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim28Q62318 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trim28Q62318 Mir767-201ENSMUST00000103256 107 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm12449-201ENSMUST00000117572 234 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm23434-201ENSMUST00000157179 100 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm6788-201ENSMUST00000166459 270 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm25069-201ENSMUST00000175238 86 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm22070-201ENSMUST00000178475 107 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm27753-201ENSMUST00000184742 203 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm37037-201ENSMUST00000194475 424 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm44425-201ENSMUST00000203739 429 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm22978-201ENSMUST00000082607 160 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm26327-201ENSMUST00000093724 111 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim28Q62318 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim28Q62318 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.93□□□□□ -1.94
Trim28Q62318 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trim28Q62318 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Trim28Q62318 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.92□□□□□ -1.94
Trim28Q62318 Gm14843-201ENSMUST00000119596 212 ntBASIC2.92□□□□□ -1.94
Trim28Q62318 Gm23470-201ENSMUST00000157129 120 ntBASIC2.92□□□□□ -1.94
Trim28Q62318 Gm25060-201ENSMUST00000157374 130 ntBASIC2.92□□□□□ -1.94
Trim28Q62318 Gm29167-201ENSMUST00000190024 377 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms