Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm24172-201ENSMUST00000104127 117 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 n-R5s202-201ENSMUST00000104517 114 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm11856-201ENSMUST00000118712 276 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm22236-201ENSMUST00000157093 106 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm25384-201ENSMUST00000157807 105 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm18417-201ENSMUST00000176564 648 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm24862-201ENSMUST00000179103 79 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm23310-201ENSMUST00000179105 79 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm25461-201ENSMUST00000179293 79 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm24966-201ENSMUST00000082443 79 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Gm24625-201ENSMUST00000082622 130 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Mir214-201ENSMUST00000083582 110 ntBASIC-0.31□□□□□ -2.46
Trav6d-4Q5R1I0 Mir670-201ENSMUST00000102380 100 ntBASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Gm25543-201ENSMUST00000122678 312 ntBASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Mir191-201ENSMUST00000196210 74 ntBASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Gm45315-201ENSMUST00000209283 333 ntBASIC-0.32□□□□□ -2.46
Trav6d-4Q5R1I0 Snord89-201ENSMUST00000104516 110 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm23118-201ENSMUST00000122657 187 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm3221-201ENSMUST00000164869 440 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm43220-201ENSMUST00000199299 282 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm44282-201ENSMUST00000203199 190 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.33□□□□□ -2.46
Trav6d-4Q5R1I0 Gm23000-201ENSMUST00000157083 139 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm24960-201ENSMUST00000157923 90 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm25838-201ENSMUST00000158920 120 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm44337-201ENSMUST00000196553 114 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm45232-201ENSMUST00000207811 162 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.34□□□□□ -2.46
Trav6d-4Q5R1I0 Gm12779-201ENSMUST00000121496 143 ntBASIC-0.35□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.35□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.35□□□□□ -2.47
Trav6d-4Q5R1I0 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.35□□□□□ -2.47
Trav6d-4Q5R1I0 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.35□□□□□ -2.47
Trav6d-4Q5R1I0 AC124569.4-201ENSMUST00000223830 1220 ntBASIC-0.35□□□□□ -2.47
Trav6d-4Q5R1I0 Gm25697-201ENSMUST00000082902 98 ntBASIC-0.35□□□□□ -2.47
Trav6d-4Q5R1I0 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Trav6d-4Q5R1I0 Anp32-ps-201ENSMUST00000118265 388 ntBASIC-0.36□□□□□ -2.47
Trav6d-4Q5R1I0 Gm11512-201ENSMUST00000119669 663 ntBASIC-0.36□□□□□ -2.47
Trav6d-4Q5R1I0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.36□□□□□ -2.47
Trav6d-4Q5R1I0 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.36□□□□□ -2.47
Trav6d-4Q5R1I0 AC125167.1-201ENSMUST00000198698 141 ntBASIC-0.36□□□□□ -2.47
Trav6d-4Q5R1I0 AC157476.1-201ENSMUST00000215555 169 ntBASIC-0.36□□□□□ -2.47
Trav6d-4Q5R1I0 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.36□□□□□ -2.47
Trav6d-4Q5R1I0 Gm23422-201ENSMUST00000102000 107 ntBASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 Snord69-201ENSMUST00000104024 80 ntBASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22281-201ENSMUST00000157198 103 ntBASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 Gm23516-201ENSMUST00000093728 107 ntBASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.37□□□□□ -2.47
Trav6d-4Q5R1I0 Gm24338-201ENSMUST00000104205 127 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22888-201ENSMUST00000158640 77 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22584-201ENSMUST00000177935 92 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm28740-201ENSMUST00000186142 215 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm36984-201ENSMUST00000192770 235 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm36953-201ENSMUST00000195295 268 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm18113-201ENSMUST00000220630 303 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Platr25-208ENSMUST00000222602 939 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm26457-201ENSMUST00000082678 78 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm22508-201ENSMUST00000082772 110 ntBASIC-0.38□□□□□ -2.47
Trav6d-4Q5R1I0 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm11254-201ENSMUST00000122368 653 ntBASIC-0.39□□□□□ -2.47
Trav6d-4Q5R1I0 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms