Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm19123-201ENSMUST00000190716 651 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm28408-201ENSMUST00000191557 463 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm8125-201ENSMUST00000216602 738 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.29
Trav3-3Q5R1C3 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 Gm24401-201ENSMUST00000157868 91 ntBASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 Gm37713-201ENSMUST00000191746 198 ntBASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 Gm37801-201ENSMUST00000194754 274 ntBASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.71□□□□□ -2.3
Trav3-3Q5R1C3 Mir3098-201ENSMUST00000175416 87 ntBASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 Gm25284-201ENSMUST00000180345 141 ntBASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 Gm28288-201ENSMUST00000191019 214 ntBASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 Gm44396-201ENSMUST00000199843 114 ntBASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 Gm22884-201ENSMUST00000083127 140 ntBASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trav3-3Q5R1C3 Gm22750-201ENSMUST00000102076 103 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Gm23336-201ENSMUST00000117023 123 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Gm15162-201ENSMUST00000119325 283 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Gm22515-201ENSMUST00000158273 305 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Gm27410-201ENSMUST00000183851 115 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Gm28794-201ENSMUST00000185276 136 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Gm19777-201ENSMUST00000191940 358 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Gm25697-201ENSMUST00000082902 98 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.69□□□□□ -2.3
Trav3-3Q5R1C3 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm11798-201ENSMUST00000119150 421 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm11794-201ENSMUST00000119446 237 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm28862-201ENSMUST00000188246 163 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm37337-201ENSMUST00000192601 993 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm45543-201ENSMUST00000209327 88 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm23614-201ENSMUST00000082598 107 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm25930-201ENSMUST00000082785 107 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Gm24523-201ENSMUST00000083965 132 ntBASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Trav3-3Q5R1C3 Mir343-201ENSMUST00000102360 75 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Gm26080-201ENSMUST00000104069 131 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Gm23232-201ENSMUST00000157300 105 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Gm43898-201ENSMUST00000204456 424 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Gm25079-201ENSMUST00000082529 203 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Mir22-201ENSMUST00000083595 95 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.67□□□□□ -2.3
Trav3-3Q5R1C3 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm23022-201ENSMUST00000158768 180 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm20386-201ENSMUST00000174010 132 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm24818-201ENSMUST00000175093 161 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm7958-201ENSMUST00000178255 468 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm7950-201ENSMUST00000179633 468 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm26968-201ENSMUST00000182894 481 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm29014-201ENSMUST00000191422 326 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Gm44465-201ENSMUST00000199536 114 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.66□□□□□ -2.3
Trav3-3Q5R1C3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm12748-201ENSMUST00000120763 504 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm22791-201ENSMUST00000157232 145 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm23542-201ENSMUST00000158208 96 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm24810-201ENSMUST00000175317 70 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm23289-201ENSMUST00000175615 108 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm27540-201ENSMUST00000184950 187 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm29229-201ENSMUST00000188874 323 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm44326-201ENSMUST00000198226 101 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm44473-201ENSMUST00000204039 152 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm5023-201ENSMUST00000217442 587 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Mir496a-201ENSMUST00000093627 79 ntBASIC0.65□□□□□ -2.31
Trav3-3Q5R1C3 Gm24283-201ENSMUST00000104233 107 ntBASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Trav3-3Q5R1C3 Gm24499-201ENSMUST00000158446 104 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms