Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.95□□□□□ -1.94
Rnf180Q3U827 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.95□□□□□ -1.94
Rnf180Q3U827 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.95□□□□□ -1.94
Rnf180Q3U827 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.95□□□□□ -1.94
Rnf180Q3U827 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.95□□□□□ -1.94
Rnf180Q3U827 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Rnf180Q3U827 Gm22673-201ENSMUST00000104415 131 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm22193-201ENSMUST00000116868 76 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm22281-201ENSMUST00000157198 103 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm24440-201ENSMUST00000157236 63 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm25914-201ENSMUST00000157618 153 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm22330-201ENSMUST00000158068 115 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm24512-201ENSMUST00000174963 65 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm29597-201ENSMUST00000188035 308 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm38183-201ENSMUST00000193189 205 ntBASIC2.94□□□□□ -1.94
Rnf180Q3U827 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm26135-201ENSMUST00000101993 72 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm26105-201ENSMUST00000157253 190 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm23381-201ENSMUST00000157676 94 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm23209-201ENSMUST00000158667 110 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm17528-201ENSMUST00000171026 239 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm24304-201ENSMUST00000177635 107 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Snord50b-201ENSMUST00000178497 72 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Mir6405-201ENSMUST00000184584 124 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm18188-201ENSMUST00000219386 478 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.93□□□□□ -1.94
Rnf180Q3U827 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Rnf180Q3U827 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Rnf180Q3U827 Gm23109-201ENSMUST00000116867 126 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Gm14652-201ENSMUST00000118479 235 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Mir28b-201ENSMUST00000175399 80 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Gm43676-201ENSMUST00000197532 540 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Gm19118-201ENSMUST00000222554 98 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Gm11351-202ENSMUST00000225724 478 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Gm22248-201ENSMUST00000082482 150 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.92□□□□□ -1.94
Rnf180Q3U827 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Rnf180Q3U827 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Gm13797-201ENSMUST00000121792 120 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Gm22989-201ENSMUST00000158313 86 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Gm27285-201ENSMUST00000183875 127 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.91□□□□□ -1.94
Rnf180Q3U827 Gm37007-201ENSMUST00000194234 319 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Mir1291-201ENSMUST00000199842 117 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Gm45445-201ENSMUST00000209586 232 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Gm18346-201ENSMUST00000216782 325 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 Snora34-201ENSMUST00000083402 138 ntBASIC2.91□□□□□ -1.94
Rnf180Q3U827 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Rnf180Q3U827 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Rnf180Q3U827 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
Rnf180Q3U827 Gm25538-201ENSMUST00000101943 107 ntBASIC2.9□□□□□ -1.95
Rnf180Q3U827 Gm22151-201ENSMUST00000116963 58 ntBASIC2.9□□□□□ -1.95
Rnf180Q3U827 Gm13862-201ENSMUST00000121220 197 ntBASIC2.9□□□□□ -1.95
Rnf180Q3U827 Gm24896-201ENSMUST00000122741 135 ntBASIC2.9□□□□□ -1.95
Rnf180Q3U827 Gm25494-201ENSMUST00000158143 100 ntBASIC2.9□□□□□ -1.95
Rnf180Q3U827 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Rnf180Q3U827 Gm25933-201ENSMUST00000178943 108 ntBASIC2.9□□□□□ -1.95
Rnf180Q3U827 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Rnf180Q3U827 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.9□□□□□ -1.95
Rnf180Q3U827 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.9□□□□□ -1.95
Rnf180Q3U827 Gm23653-201ENSMUST00000116751 97 ntBASIC2.89□□□□□ -1.95
Rnf180Q3U827 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.89□□□□□ -1.95
Rnf180Q3U827 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Rnf180Q3U827 Gm25888-201ENSMUST00000157778 302 ntBASIC2.89□□□□□ -1.95
Rnf180Q3U827 Gm17161-201ENSMUST00000169187 524 ntBASIC2.89□□□□□ -1.95
Rnf180Q3U827 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.89□□□□□ -1.95
Rnf180Q3U827 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
Rnf180Q3U827 Gm25634-201ENSMUST00000082667 105 ntBASIC2.89□□□□□ -1.95
Rnf180Q3U827 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Rnf180Q3U827 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Rnf180Q3U827 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Rnf180Q3U827 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Rnf180Q3U827 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.88□□□□□ -1.95
Rnf180Q3U827 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Rnf180Q3U827 Gm26411-201ENSMUST00000157668 107 ntBASIC2.88□□□□□ -1.95
Rnf180Q3U827 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.88□□□□□ -1.95
Rnf180Q3U827 Gm36189-201ENSMUST00000204113 523 ntBASIC2.88□□□□□ -1.95
Rnf180Q3U827 Gm26126-201ENSMUST00000083188 164 ntBASIC2.88□□□□□ -1.95
Rnf180Q3U827 Gm24453-201ENSMUST00000083346 76 ntBASIC2.88□□□□□ -1.95
Rnf180Q3U827 Mir302d-201ENSMUST00000083513 66 ntBASIC2.88□□□□□ -1.95
Rnf180Q3U827 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Rnf180Q3U827 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.88□□□□□ -1.95
Rnf180Q3U827 Gm25274-201ENSMUST00000104296 135 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm25223-201ENSMUST00000158200 110 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm22858-201ENSMUST00000174972 76 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm20613-201ENSMUST00000175828 345 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm33866-201ENSMUST00000196911 289 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm44182-201ENSMUST00000204052 115 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm24977-201ENSMUST00000083106 163 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm26493-201ENSMUST00000083155 136 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.87□□□□□ -1.95
Rnf180Q3U827 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.87□□□□□ -1.95
Rnf180Q3U827 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
Rnf180Q3U827 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 147.7 ms