Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm25820-202ENSMUST00000197479 128 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Mir3068-202ENSMUST00000197755 79 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm24313-201ENSMUST00000082561 133 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm22421-201ENSMUST00000083058 107 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm24283-201ENSMUST00000104233 107 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm23202-201ENSMUST00000104376 129 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm22051-201ENSMUST00000117002 127 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm12351-201ENSMUST00000118727 292 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm24937-201ENSMUST00000122597 134 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm23889-201ENSMUST00000122689 104 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm22075-201ENSMUST00000158599 192 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm23476-201ENSMUST00000158881 274 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm26379-202ENSMUST00000200225 132 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm42739-201ENSMUST00000200687 226 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm18502-201ENSMUST00000218679 199 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.28□□□□□ -2.04
Col28a1Q2UY11 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm25938-201ENSMUST00000104139 166 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm23551-201ENSMUST00000116852 121 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm22713-201ENSMUST00000116895 130 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm13922-201ENSMUST00000119505 156 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm22083-201ENSMUST00000157586 102 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm29308-201ENSMUST00000188863 315 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm28537-201ENSMUST00000189026 315 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm29631-201ENSMUST00000191065 315 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm42988-201ENSMUST00000198116 225 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm22248-201ENSMUST00000082482 150 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Gm23249-201ENSMUST00000083369 161 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.27□□□□□ -2.05
Col28a1Q2UY11 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.27□□□□□ -2.05
Col28a1Q2UY11 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Mir669d-201ENSMUST00000104644 121 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm12143-201ENSMUST00000119666 332 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm23559-201ENSMUST00000157824 103 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm22099-201ENSMUST00000157925 123 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm25267-201ENSMUST00000158522 63 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm24054-201ENSMUST00000158619 105 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm24388-201ENSMUST00000177872 107 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm27369-201ENSMUST00000185182 71 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm28647-201ENSMUST00000188416 197 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm34139-201ENSMUST00000196166 294 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm42834-201ENSMUST00000196845 256 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm24661-201ENSMUST00000083205 104 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col28a1Q2UY11 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm24280-201ENSMUST00000104237 134 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Mir1298-201ENSMUST00000116681 98 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm13801-201ENSMUST00000120750 160 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm11786-201ENSMUST00000120799 155 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm22557-201ENSMUST00000157804 102 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm24846-201ENSMUST00000158033 108 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm24771-201ENSMUST00000158508 137 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm17161-201ENSMUST00000169187 524 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm27793-201ENSMUST00000183405 76 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Mir7667-201ENSMUST00000183866 63 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Mir7009-201ENSMUST00000184519 64 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm27959-201ENSMUST00000185172 111 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm44338-201ENSMUST00000198614 110 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm43993-201ENSMUST00000203972 247 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm25796-201ENSMUST00000082645 163 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm25142-201ENSMUST00000082698 107 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Gm26456-201ENSMUST00000082831 111 ntBASIC2.25□□□□□ -2.05
Col28a1Q2UY11 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm14843-201ENSMUST00000119596 212 ntBASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm16561-201ENSMUST00000163001 192 ntBASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm27399-201ENSMUST00000184250 78 ntBASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm42855-201ENSMUST00000197388 253 ntBASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm44555-201ENSMUST00000209008 148 ntBASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm5010-201ENSMUST00000213131 260 ntBASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col28a1Q2UY11 Gm26135-201ENSMUST00000101993 72 ntBASIC2.23□□□□□ -2.05
Col28a1Q2UY11 Mir669b-201ENSMUST00000102172 97 ntBASIC2.23□□□□□ -2.05
Col28a1Q2UY11 Gm22373-201ENSMUST00000104584 89 ntBASIC2.23□□□□□ -2.05
Col28a1Q2UY11 Gm15861-201ENSMUST00000120979 339 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms