Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm44338-201ENSMUST00000198614 110 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm25136-201ENSMUST00000083253 115 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col17a1Q07563 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col17a1Q07563 Gm26135-201ENSMUST00000101993 72 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Gm14782-201ENSMUST00000120151 195 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Snord50b-201ENSMUST00000178497 72 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Gm27718-201ENSMUST00000183721 86 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Mir6352-201ENSMUST00000184495 116 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Mir6985-201ENSMUST00000184641 61 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Mir6901-201ENSMUST00000185062 62 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.59□□□□□ -1.84
Col17a1Q07563 Gm23932-201ENSMUST00000082914 107 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Gm25684-201ENSMUST00000083941 107 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 Gm10172-201ENSMUST00000085929 558 ntBASIC3.59□□□□□ -1.84
Col17a1Q07563 AC152979.2-201ENSMUST00000219702 3814 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm24951-201ENSMUST00000102182 109 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Mir1298-201ENSMUST00000116681 98 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm14069-201ENSMUST00000120815 229 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm23184-201ENSMUST00000122594 131 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm26277-201ENSMUST00000157097 152 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm23752-201ENSMUST00000157584 115 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Mir6372-201ENSMUST00000185114 109 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm43206-201ENSMUST00000197990 114 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.58□□□□□ -1.84
Col17a1Q07563 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm23038-201ENSMUST00000083873 104 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm24697-201ENSMUST00000083881 107 ntBASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.58□□□□□ -1.84
Col17a1Q07563 Gm12304-201ENSMUST00000120312 385 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Gm22159-201ENSMUST00000158412 130 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Gm24736-201ENSMUST00000158862 130 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Gm29429-201ENSMUST00000187071 121 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col17a1Q07563 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Gm24152-201ENSMUST00000082764 163 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Snora19-201ENSMUST00000082962 132 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Gm23658-201ENSMUST00000083233 132 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Mir448-201ENSMUST00000083516 112 ntBASIC3.57□□□□□ -1.84
Col17a1Q07563 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col17a1Q07563 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Col17a1Q07563 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Col17a1Q07563 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col17a1Q07563 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col17a1Q07563 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col17a1Q07563 Gm15760-201ENSMUST00000119553 283 ntBASIC3.56□□□□□ -1.84
Col17a1Q07563 Gm25637-201ENSMUST00000157529 107 ntBASIC3.56□□□□□ -1.84
Col17a1Q07563 Mir6335-201ENSMUST00000184081 98 ntBASIC3.56□□□□□ -1.84
Col17a1Q07563 Gm22806-201ENSMUST00000082738 136 ntBASIC3.56□□□□□ -1.84
Col17a1Q07563 Mir466-201ENSMUST00000093591 73 ntBASIC3.56□□□□□ -1.84
Col17a1Q07563 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col17a1Q07563 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.56□□□□□ -1.84
Col17a1Q07563 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
Col17a1Q07563 Gm22148-201ENSMUST00000104445 107 ntBASIC3.55□□□□□ -1.84
Col17a1Q07563 Gm13922-201ENSMUST00000119505 156 ntBASIC3.55□□□□□ -1.84
Col17a1Q07563 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.55□□□□□ -1.84
Col17a1Q07563 Gm25851-201ENSMUST00000082794 107 ntBASIC3.55□□□□□ -1.84
Col17a1Q07563 Gm22681-201ENSMUST00000083853 106 ntBASIC3.55□□□□□ -1.84
Col17a1Q07563 Gm24030-201ENSMUST00000083931 164 ntBASIC3.55□□□□□ -1.84
Col17a1Q07563 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col17a1Q07563 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.55□□□□□ -1.84
Col17a1Q07563 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col17a1Q07563 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col17a1Q07563 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.55□□□□□ -1.84
Col17a1Q07563 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.55□□□□□ -1.84
Col17a1Q07563 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col17a1Q07563 Gm14626-201ENSMUST00000117619 216 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Gm23470-201ENSMUST00000157129 120 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Gm16561-201ENSMUST00000163001 192 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Gm24799-201ENSMUST00000178431 79 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col17a1Q07563 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col17a1Q07563 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Col17a1Q07563 Gm24839-201ENSMUST00000122602 107 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Mir5129-201ENSMUST00000174938 78 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Gm37417-201ENSMUST00000195257 454 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Gm43220-201ENSMUST00000199299 282 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Gm22353-201ENSMUST00000083918 136 ntBASIC3.54□□□□□ -1.84
Col17a1Q07563 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col17a1Q07563 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm22679-201ENSMUST00000116975 100 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm14551-201ENSMUST00000120802 256 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm26049-201ENSMUST00000157313 108 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm22098-201ENSMUST00000157930 85 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm22665-201ENSMUST00000158720 275 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm22858-201ENSMUST00000174972 76 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm24308-201ENSMUST00000177773 114 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm25402-201ENSMUST00000082966 131 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm26314-201ENSMUST00000083891 107 ntBASIC3.53□□□□□ -1.84
Col17a1Q07563 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col17a1Q07563 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 178.2 ms