Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm25153-201ENSMUST00000157118 156 ntBASIC3.26□□□□□ -1.89
Col6a1Q04857 Mir1291-201ENSMUST00000199842 117 ntBASIC3.26□□□□□ -1.89
Col6a1Q04857 Gm34314-201ENSMUST00000203622 367 ntBASIC3.26□□□□□ -1.89
Col6a1Q04857 Gm43898-201ENSMUST00000204456 424 ntBASIC3.26□□□□□ -1.89
Col6a1Q04857 Snora34-201ENSMUST00000083402 138 ntBASIC3.26□□□□□ -1.89
Col6a1Q04857 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col6a1Q04857 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a1Q04857 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm22193-201ENSMUST00000116868 76 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm12954-201ENSMUST00000118610 611 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm8260-201ENSMUST00000119230 353 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm2830-201ENSMUST00000140330 385 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm25280-201ENSMUST00000157269 101 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm22612-201ENSMUST00000158293 101 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Mir3076-201ENSMUST00000175415 60 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm38364-201ENSMUST00000191814 179 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Mir378a-201ENSMUST00000198300 66 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm23303-201ENSMUST00000082714 152 ntBASIC3.25□□□□□ -1.89
Col6a1Q04857 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm24890-201ENSMUST00000104389 102 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm11285-201ENSMUST00000118443 322 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm13913-201ENSMUST00000121126 260 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm24480-201ENSMUST00000157442 103 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm22382-201ENSMUST00000158185 130 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Mir28b-201ENSMUST00000175399 80 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm22800-201ENSMUST00000175627 94 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm25528-201ENSMUST00000180264 132 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm28647-201ENSMUST00000188416 197 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm18546-201ENSMUST00000197245 676 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm24030-201ENSMUST00000083931 164 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.24□□□□□ -1.89
Col6a1Q04857 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.24□□□□□ -1.89
Col6a1Q04857 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Col6a1Q04857 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a1Q04857 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm24126-201ENSMUST00000104111 106 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm16186-201ENSMUST00000120132 216 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm15214-201ENSMUST00000122155 470 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm22227-201ENSMUST00000157356 259 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm25012-201ENSMUST00000158396 164 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm27934-201ENSMUST00000158795 63 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm6030-201ENSMUST00000078768 402 ntBASIC3.23□□□□□ -1.89
Col6a1Q04857 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.23□□□□□ -1.89
Col6a1Q04857 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a1Q04857 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm26247-201ENSMUST00000116702 91 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm24274-201ENSMUST00000116787 124 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm25889-201ENSMUST00000157775 107 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm22853-201ENSMUST00000174974 131 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Mir7657-201ENSMUST00000196051 57 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm45452-201ENSMUST00000210905 177 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.22□□□□□ -1.89
Col6a1Q04857 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a1Q04857 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm25409-201ENSMUST00000083764 131 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Mir466-201ENSMUST00000093591 73 ntBASIC3.22□□□□□ -1.89
Col6a1Q04857 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a1Q04857 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a1Q04857 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a1Q04857 Gm25377-201ENSMUST00000104334 129 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm26011-201ENSMUST00000104410 104 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm24634-201ENSMUST00000158672 107 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm5224-201ENSMUST00000183060 350 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Mir8096-201ENSMUST00000184526 127 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm28900-201ENSMUST00000185232 156 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.21□□□□□ -1.9
Col6a1Q04857 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm42844-201ENSMUST00000200355 112 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm25797-201ENSMUST00000082640 107 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Snord61-201ENSMUST00000083176 71 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm26265-201ENSMUST00000083277 135 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a1Q04857 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.21□□□□□ -1.9
Col6a1Q04857 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm25753-201ENSMUST00000116792 121 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm24595-201ENSMUST00000122501 110 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm23588-201ENSMUST00000157659 99 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm26084-201ENSMUST00000157903 104 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm22961-201ENSMUST00000157964 106 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm24277-201ENSMUST00000158661 104 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm18665-201ENSMUST00000189783 270 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm38311-201ENSMUST00000192945 165 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm25006-201ENSMUST00000083813 107 ntBASIC3.2□□□□□ -1.9
Col6a1Q04857 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms