Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm26056-201ENSMUST00000083043 104 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm24431-201ENSMUST00000104073 66 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm25805-201ENSMUST00000122788 108 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm23390-201ENSMUST00000157393 106 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm23277-201ENSMUST00000157914 136 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm24510-201ENSMUST00000174965 94 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm27793-201ENSMUST00000183405 76 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm27236-201ENSMUST00000184147 442 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm10105-201ENSMUST00000184601 270 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm37918-201ENSMUST00000192071 120 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Gm26107-201ENSMUST00000083972 107 ntBASIC0.77□□□□□ -2.29
Nkx3-1P97436 Mir544-201ENSMUST00000103813 78 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 Gm13518-201ENSMUST00000120018 233 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 Gm27587-201ENSMUST00000185116 163 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 Gm43220-201ENSMUST00000199299 282 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 Gm45119-201ENSMUST00000207612 199 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 Gm10092-201ENSMUST00000077110 180 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 Gm23721-201ENSMUST00000083005 107 ntBASIC0.76□□□□□ -2.29
Nkx3-1P97436 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm23142-201ENSMUST00000101848 105 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm26240-201ENSMUST00000101893 105 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm22935-201ENSMUST00000103960 104 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm11798-201ENSMUST00000119150 421 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Nkx3-1P97436 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm24020-201ENSMUST00000180156 108 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm38274-201ENSMUST00000195689 148 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm43976-201ENSMUST00000203637 235 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm44687-201ENSMUST00000204975 235 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.75□□□□□ -2.29
Nkx3-1P97436 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.75□□□□□ -2.29
Nkx3-1P97436 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.75□□□□□ -2.29
Nkx3-1P97436 Gm25773-201ENSMUST00000116718 127 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.74□□□□□ -2.29
Nkx3-1P97436 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm22279-201ENSMUST00000157200 93 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm22164-201ENSMUST00000158413 106 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm25166-201ENSMUST00000158909 111 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm20462-201ENSMUST00000172623 408 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm25253-201ENSMUST00000179958 107 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm28344-201ENSMUST00000185704 279 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm29613-201ENSMUST00000185846 313 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm28409-201ENSMUST00000187064 103 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm29544-201ENSMUST00000188860 313 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm28808-201ENSMUST00000190978 313 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm28408-201ENSMUST00000191557 463 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm43602-201ENSMUST00000196772 300 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Mir7661-201ENSMUST00000197023 61 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Mir376a-201ENSMUST00000197584 68 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm19855-201ENSMUST00000210145 249 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm24152-201ENSMUST00000082764 163 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Mir155-201ENSMUST00000083463 65 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm25513-201ENSMUST00000083861 162 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Mir496a-201ENSMUST00000093627 79 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm24163-201ENSMUST00000093660 132 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.74□□□□□ -2.29
Nkx3-1P97436 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm22709-201ENSMUST00000116893 111 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm14574-201ENSMUST00000120644 279 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm22447-201ENSMUST00000158155 92 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm23355-201ENSMUST00000177614 107 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm24799-201ENSMUST00000178431 79 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm27421-201ENSMUST00000184729 167 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm44465-201ENSMUST00000199536 114 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Snora41-201ENSMUST00000082668 132 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm23299-201ENSMUST00000082708 79 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm25789-201ENSMUST00000083294 76 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Mir32-201ENSMUST00000083610 70 ntBASIC0.73□□□□□ -2.29
Nkx3-1P97436 Gm12143-201ENSMUST00000119666 332 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms