Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm44976-201ENSMUST00000205543 261 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm25636-201ENSMUST00000082666 133 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm22738-201ENSMUST00000083440 147 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm25409-201ENSMUST00000083764 131 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm23847-201ENSMUST00000083829 110 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sox1P53783 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sox1P53783 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Sox1P53783 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sox1P53783 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sox1P53783 Gm24747-201ENSMUST00000157835 87 ntBASIC3.15□□□□□ -1.91
Sox1P53783 Gm26084-201ENSMUST00000157903 104 ntBASIC3.15□□□□□ -1.91
Sox1P53783 Gm24634-201ENSMUST00000158672 107 ntBASIC3.15□□□□□ -1.91
Sox1P53783 Gm23504-201ENSMUST00000158988 95 ntBASIC3.15□□□□□ -1.91
Sox1P53783 Gm34314-201ENSMUST00000203622 367 ntBASIC3.15□□□□□ -1.91
Sox1P53783 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.15□□□□□ -1.91
Sox1P53783 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.15□□□□□ -1.91
Sox1P53783 Gm26126-201ENSMUST00000083188 164 ntBASIC3.15□□□□□ -1.91
Sox1P53783 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sox1P53783 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sox1P53783 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Sox1P53783 Gm13885-201ENSMUST00000117569 187 ntBASIC3.14□□□□□ -1.91
Sox1P53783 Gm12086-201ENSMUST00000120863 228 ntBASIC3.14□□□□□ -1.91
Sox1P53783 Gm22221-201ENSMUST00000157362 103 ntBASIC3.14□□□□□ -1.91
Sox1P53783 Gm25882-201ENSMUST00000157784 85 ntBASIC3.14□□□□□ -1.91
Sox1P53783 Gm27582-201ENSMUST00000184084 126 ntBASIC3.14□□□□□ -1.91
Sox1P53783 Gm18665-201ENSMUST00000189783 270 ntBASIC3.14□□□□□ -1.91
Sox1P53783 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Sox1P53783 Gm43381-201ENSMUST00000198553 165 ntBASIC3.14□□□□□ -1.91
Sox1P53783 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.14□□□□□ -1.91
Sox1P53783 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.14□□□□□ -1.91
Sox1P53783 Gm23445-201ENSMUST00000082800 107 ntBASIC3.14□□□□□ -1.91
Sox1P53783 Gm23246-201ENSMUST00000083371 67 ntBASIC3.14□□□□□ -1.91
Sox1P53783 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sox1P53783 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Sox1P53783 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sox1P53783 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sox1P53783 Snord100-201ENSMUST00000116836 74 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm11644-201ENSMUST00000119735 150 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm12213-201ENSMUST00000119924 353 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm25888-201ENSMUST00000157778 302 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm24075-201ENSMUST00000158175 72 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm22946-201ENSMUST00000158558 82 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm25380-201ENSMUST00000175463 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm24641-201ENSMUST00000178055 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm25484-201ENSMUST00000178217 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm26138-201ENSMUST00000179236 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm22821-201ENSMUST00000179288 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm27959-201ENSMUST00000185172 111 ntBASIC3.13□□□□□ -1.91
Sox1P53783 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.13□□□□□ -1.91
Sox1P53783 Gm42719-201ENSMUST00000197393 355 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm23140-201ENSMUST00000082487 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm23298-201ENSMUST00000083181 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm24614-201ENSMUST00000083269 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm22057-201ENSMUST00000083387 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Mir201-201ENSMUST00000083470 66 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm25006-201ENSMUST00000083813 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Gm25516-201ENSMUST00000083857 107 ntBASIC3.13□□□□□ -1.91
Sox1P53783 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sox1P53783 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
Sox1P53783 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox1P53783 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sox1P53783 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sox1P53783 Gm12513-201ENSMUST00000118617 352 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Gm24598-201ENSMUST00000122510 74 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Gm25323-201ENSMUST00000122555 103 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Gm25113-201ENSMUST00000157185 143 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Gm23858-201ENSMUST00000158384 106 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sox1P53783 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.12□□□□□ -1.91
Sox1P53783 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.12□□□□□ -1.91
Sox1P53783 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.12□□□□□ -1.91
Sox1P53783 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Gm26494-201ENSMUST00000083154 143 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Gm24615-201ENSMUST00000083268 113 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Gm24493-201ENSMUST00000083805 143 ntBASIC3.12□□□□□ -1.91
Sox1P53783 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox1P53783 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Sox1P53783 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Sox1P53783 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sox1P53783 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox1P53783 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sox1P53783 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Sox1P53783 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sox1P53783 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sox1P53783 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Sox1P53783 Snord64-201ENSMUST00000104003 67 ntBASIC3.11□□□□□ -1.91
Sox1P53783 Gm24126-201ENSMUST00000104111 106 ntBASIC3.11□□□□□ -1.91
Sox1P53783 Gm23015-201ENSMUST00000104145 128 ntBASIC3.11□□□□□ -1.91
Sox1P53783 Gm26423-201ENSMUST00000104277 128 ntBASIC3.11□□□□□ -1.91
Sox1P53783 Gm12954-201ENSMUST00000118610 611 ntBASIC3.11□□□□□ -1.91
Sox1P53783 Gm20438-201ENSMUST00000174441 329 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms