Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm23010-201ENSMUST00000104151 126 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 Gm11936-201ENSMUST00000118323 160 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 Gm22027-201ENSMUST00000122737 127 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.3□□□□□ -2.04
Ercc3P49135 Gm25491-201ENSMUST00000158733 308 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 Gm17052-201ENSMUST00000165496 289 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ercc3P49135 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 Mir465d-201ENSMUST00000196314 58 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 Gm9795-201ENSMUST00000062156 693 ntBASIC2.3□□□□□ -2.04
Ercc3P49135 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Ercc3P49135 Snord70-201ENSMUST00000104157 87 ntBASIC2.29□□□□□ -2.04
Ercc3P49135 Gm15067-201ENSMUST00000119534 156 ntBASIC2.29□□□□□ -2.04
Ercc3P49135 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.29□□□□□ -2.04
Ercc3P49135 Gm24783-201ENSMUST00000157639 100 ntBASIC2.29□□□□□ -2.04
Ercc3P49135 Gm25184-201ENSMUST00000157753 163 ntBASIC2.29□□□□□ -2.04
Ercc3P49135 Gm23640-201ENSMUST00000157860 104 ntBASIC2.29□□□□□ -2.04
Ercc3P49135 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.29□□□□□ -2.04
Ercc3P49135 Gm24805-201ENSMUST00000082931 104 ntBASIC2.29□□□□□ -2.04
Ercc3P49135 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.29□□□□□ -2.04
Ercc3P49135 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Ercc3P49135 Gm24851-201ENSMUST00000158028 103 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Gm22727-201ENSMUST00000158090 116 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Gm23854-201ENSMUST00000158378 108 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Gm22075-201ENSMUST00000158599 192 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Gm25718-201ENSMUST00000158632 118 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Ercc3P49135 Gm7958-201ENSMUST00000178255 468 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Gm7950-201ENSMUST00000179633 468 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Ercc3P49135 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Gm44938-201ENSMUST00000208614 427 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Gm26493-201ENSMUST00000083155 136 ntBASIC2.28□□□□□ -2.04
Ercc3P49135 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Ercc3P49135 Mir758-201ENSMUST00000103260 81 ntBASIC2.27□□□□□ -2.05
Ercc3P49135 Gm12143-201ENSMUST00000119666 332 ntBASIC2.27□□□□□ -2.05
Ercc3P49135 Gm23982-201ENSMUST00000157141 106 ntBASIC2.27□□□□□ -2.05
Ercc3P49135 Gm17161-201ENSMUST00000169187 524 ntBASIC2.27□□□□□ -2.05
Ercc3P49135 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.27□□□□□ -2.05
Ercc3P49135 Gm28912-201ENSMUST00000189001 234 ntBASIC2.27□□□□□ -2.05
Ercc3P49135 Gm37579-201ENSMUST00000194291 142 ntBASIC2.27□□□□□ -2.05
Ercc3P49135 Gm44977-201ENSMUST00000205283 420 ntBASIC2.27□□□□□ -2.05
Ercc3P49135 Gm22935-201ENSMUST00000103960 104 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm22195-201ENSMUST00000116861 108 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm14674-201ENSMUST00000117816 342 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Mir669n-201ENSMUST00000158636 54 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm25836-201ENSMUST00000158918 123 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm22118-201ENSMUST00000175593 171 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm28453-203ENSMUST00000187041 189 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm28921-201ENSMUST00000190219 378 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm28992-201ENSMUST00000190534 139 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm44533-201ENSMUST00000207782 268 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm45654-201ENSMUST00000210980 123 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Gm24151-201ENSMUST00000082758 141 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Snord118-201ENSMUST00000082965 135 ntBASIC2.26□□□□□ -2.05
Ercc3P49135 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ercc3P49135 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ercc3P49135 Gm23109-201ENSMUST00000116867 126 ntBASIC2.25□□□□□ -2.05
Ercc3P49135 Gm22321-201ENSMUST00000157152 104 ntBASIC2.25□□□□□ -2.05
Ercc3P49135 Gm23172-201ENSMUST00000157160 124 ntBASIC2.25□□□□□ -2.05
Ercc3P49135 U6.1-201ENSMUST00000157443 101 ntBASIC2.25□□□□□ -2.05
Ercc3P49135 Gm21885-201ENSMUST00000178891 327 ntBASIC2.25□□□□□ -2.05
Ercc3P49135 Gm35736-201ENSMUST00000203681 313 ntBASIC2.25□□□□□ -2.05
Ercc3P49135 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.25□□□□□ -2.05
Ercc3P49135 Gm11351-202ENSMUST00000225724 478 ntBASIC2.25□□□□□ -2.05
Ercc3P49135 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ercc3P49135 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ercc3P49135 Gm22883-201ENSMUST00000157376 106 ntBASIC2.24□□□□□ -2.05
Ercc3P49135 Gm23852-201ENSMUST00000158376 77 ntBASIC2.24□□□□□ -2.05
Ercc3P49135 Gm24277-201ENSMUST00000158661 104 ntBASIC2.24□□□□□ -2.05
Ercc3P49135 Gm26864-201ENSMUST00000181346 156 ntBASIC2.24□□□□□ -2.05
Ercc3P49135 Mir7225-201ENSMUST00000184178 54 ntBASIC2.24□□□□□ -2.05
Ercc3P49135 Gm27544-201ENSMUST00000185069 155 ntBASIC2.24□□□□□ -2.05
Ercc3P49135 Gm45365-201ENSMUST00000209489 256 ntBASIC2.24□□□□□ -2.05
Ercc3P49135 Gm23377-201ENSMUST00000082943 126 ntBASIC2.24□□□□□ -2.05
Ercc3P49135 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ercc3P49135 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Ercc3P49135 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm14922-201ENSMUST00000121131 163 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm23390-201ENSMUST00000157393 106 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm26150-201ENSMUST00000157426 151 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm23043-201ENSMUST00000157890 109 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm26287-201ENSMUST00000158887 81 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm5900-201ENSMUST00000179862 375 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm27511-201ENSMUST00000183502 127 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm37089-201ENSMUST00000195616 129 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Mir7021-201ENSMUST00000197026 63 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Mir466e-201ENSMUST00000198862 84 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms