Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm14883-201ENSMUST00000120179 157 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm13729-201ENSMUST00000120328 406 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm25543-201ENSMUST00000122678 312 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm27723-201ENSMUST00000157398 63 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm23355-201ENSMUST00000177614 107 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm23148-201ENSMUST00000180367 107 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm27265-201ENSMUST00000183559 77 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm36946-201ENSMUST00000192706 435 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.43□□□□□ -2.18
Col2a1P28481 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col2a1P28481 Gm22571-201ENSMUST00000082984 70 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm25258-201ENSMUST00000083049 107 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col2a1P28481 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Col2a1P28481 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col2a1P28481 Gm26156-201ENSMUST00000116999 123 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm14803-201ENSMUST00000117163 361 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm12304-201ENSMUST00000120312 385 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm25805-201ENSMUST00000122788 108 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm23589-201ENSMUST00000157660 105 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm23759-201ENSMUST00000158351 268 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm25643-201ENSMUST00000158874 103 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm17100-201ENSMUST00000168963 272 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm23977-201ENSMUST00000177871 74 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.43□□□□□ -2.18
Col2a1P28481 Mir376a-201ENSMUST00000197584 68 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.43□□□□□ -2.18
Col2a1P28481 Gm26497-201ENSMUST00000083146 107 ntBASIC1.43□□□□□ -2.18
Col2a1P28481 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.42□□□□□ -2.18
Col2a1P28481 Gm26249-201ENSMUST00000116708 118 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Gm24835-201ENSMUST00000116777 111 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Gm15365-201ENSMUST00000122392 300 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Gm23232-201ENSMUST00000157300 105 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Gm22483-201ENSMUST00000157986 274 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Gm22675-201ENSMUST00000158430 104 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Gm22527-201ENSMUST00000158816 106 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Gm25020-201ENSMUST00000178071 107 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Gm24799-201ENSMUST00000178431 79 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col2a1P28481 Gm28848-201ENSMUST00000189984 168 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.42□□□□□ -2.18
Col2a1P28481 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col2a1P28481 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Snord70-201ENSMUST00000104157 87 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Gm25875-201ENSMUST00000104323 107 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Gm14073-201ENSMUST00000117344 381 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Gm11794-201ENSMUST00000119446 237 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Gm25059-201ENSMUST00000157367 117 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Gm25664-201ENSMUST00000157697 107 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.41□□□□□ -2.18
Col2a1P28481 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col2a1P28481 Gm24445-201ENSMUST00000083981 107 ntBASIC1.41□□□□□ -2.18
Col2a1P28481 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Col2a1P28481 Gm24116-201ENSMUST00000103975 107 ntBASIC1.4□□□□□ -2.19
Col2a1P28481 Gm25715-201ENSMUST00000158627 125 ntBASIC1.4□□□□□ -2.19
Col2a1P28481 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.4□□□□□ -2.19
Col2a1P28481 Gm24304-201ENSMUST00000177635 107 ntBASIC1.4□□□□□ -2.19
Col2a1P28481 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.4□□□□□ -2.19
Col2a1P28481 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.4□□□□□ -2.19
Col2a1P28481 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.4□□□□□ -2.19
Col2a1P28481 Gm22062-201ENSMUST00000082563 107 ntBASIC1.4□□□□□ -2.19
Col2a1P28481 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Col2a1P28481 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.39□□□□□ -2.19
Col2a1P28481 Gm26105-201ENSMUST00000157253 190 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm23783-201ENSMUST00000157941 102 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm22537-201ENSMUST00000158172 199 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Mir28b-201ENSMUST00000175399 80 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm22800-201ENSMUST00000175627 94 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm27540-201ENSMUST00000184950 187 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm37801-201ENSMUST00000194754 274 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Col2a1P28481 Gm44024-201ENSMUST00000203008 476 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Col2a1P28481 Gm45791-201ENSMUST00000212908 352 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm29818-201ENSMUST00000218070 165 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm24152-201ENSMUST00000082764 163 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Gm10222-201ENSMUST00000088336 294 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.39□□□□□ -2.19
Col2a1P28481 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.39□□□□□ -2.19
Col2a1P28481 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms