Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm22283-201ENSMUST00000082556 161 ntBASIC3.21□□□□□ -1.9
Hoxd9P28357 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.21□□□□□ -1.9
Hoxd9P28357 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.21□□□□□ -1.9
Hoxd9P28357 Gm44578-201ENSMUST00000207236 3835 ntBASIC3.21□□□□□ -1.9
Hoxd9P28357 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Hoxd9P28357 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Hoxd9P28357 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Hoxd9P28357 Gm24280-201ENSMUST00000104237 134 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm23532-201ENSMUST00000104569 112 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm23601-201ENSMUST00000157259 131 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm23592-201ENSMUST00000157859 117 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm22521-201ENSMUST00000158272 134 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm24878-201ENSMUST00000158782 104 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm24816-201ENSMUST00000175311 151 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Mir7578-201ENSMUST00000183455 82 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm26379-202ENSMUST00000200225 132 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm32381-201ENSMUST00000203192 476 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.2□□□□□ -1.9
Hoxd9P28357 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Hoxd9P28357 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Hoxd9P28357 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hoxd9P28357 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Hoxd9P28357 Gm24913-201ENSMUST00000157286 107 ntBASIC3.19□□□□□ -1.9
Hoxd9P28357 Gm23324-201ENSMUST00000157421 131 ntBASIC3.19□□□□□ -1.9
Hoxd9P28357 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.19□□□□□ -1.9
Hoxd9P28357 Mir7081-201ENSMUST00000184490 75 ntBASIC3.19□□□□□ -1.9
Hoxd9P28357 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.19□□□□□ -1.9
Hoxd9P28357 Gm6801-201ENSMUST00000190697 339 ntBASIC3.19□□□□□ -1.9
Hoxd9P28357 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.19□□□□□ -1.9
Hoxd9P28357 AC124687.1-201ENSMUST00000221868 189 ntBASIC3.19□□□□□ -1.9
Hoxd9P28357 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.19□□□□□ -1.9
Hoxd9P28357 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.18□□□□□ -1.9
Hoxd9P28357 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Hoxd9P28357 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Hoxd9P28357 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hoxd9P28357 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Hoxd9P28357 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Hoxd9P28357 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Hoxd9P28357 Gm23043-201ENSMUST00000157890 109 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Gm23933-201ENSMUST00000178405 79 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Gm22910-201ENSMUST00000178568 132 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Mir6350-201ENSMUST00000183639 105 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Gm28591-201ENSMUST00000185259 183 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Gm20058-201ENSMUST00000186939 284 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Gm6030-201ENSMUST00000078768 402 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Mir489-201ENSMUST00000093599 107 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hoxd9P28357 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hoxd9P28357 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.18□□□□□ -1.9
Hoxd9P28357 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hoxd9P28357 Mir693-201ENSMUST00000102187 89 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 Gm24890-201ENSMUST00000104389 102 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 Gm23237-201ENSMUST00000104639 92 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 Gm12858-201ENSMUST00000121913 208 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 Gm27648-201ENSMUST00000184315 107 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.17□□□□□ -1.9
Hoxd9P28357 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 mt-Ts2-201ENSMUST00000082416 59 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 Gm22507-201ENSMUST00000082773 160 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.17□□□□□ -1.9
Hoxd9P28357 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hoxd9P28357 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.17□□□□□ -1.9
Hoxd9P28357 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
Hoxd9P28357 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm22115-201ENSMUST00000103976 133 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm23923-201ENSMUST00000104108 133 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm7123-201ENSMUST00000117647 213 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm20613-201ENSMUST00000175828 345 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm28282-201ENSMUST00000186072 186 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm24533-201ENSMUST00000083138 196 ntBASIC3.16□□□□□ -1.9
Hoxd9P28357 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hoxd9P28357 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.16□□□□□ -1.9
Hoxd9P28357 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Hoxd9P28357 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 Gm25878-201ENSMUST00000104327 93 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 Gm22545-201ENSMUST00000104350 132 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 Gm13246-201ENSMUST00000120994 315 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 Gm14709-201ENSMUST00000121225 304 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 Gm36776-201ENSMUST00000207006 203 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.15□□□□□ -1.91
Hoxd9P28357 Gm25856-201ENSMUST00000082786 75 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 Gm22739-201ENSMUST00000083437 160 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 Gm24261-201ENSMUST00000083744 104 ntBASIC3.15□□□□□ -1.91
Hoxd9P28357 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Hoxd9P28357 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm22750-201ENSMUST00000102076 103 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm23609-201ENSMUST00000104542 127 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm14674-201ENSMUST00000117816 342 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm26100-201ENSMUST00000157245 127 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm17117-201ENSMUST00000163665 299 ntBASIC3.14□□□□□ -1.91
Hoxd9P28357 Gm26864-201ENSMUST00000181346 156 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms