Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Gm24394-201ENSMUST00000158141 123 ntBASIC2.54□□□□□ -2
Gjb1P28230 Gm24076-201ENSMUST00000158179 94 ntBASIC2.54□□□□□ -2
Gjb1P28230 Gm26004-201ENSMUST00000158804 116 ntBASIC2.54□□□□□ -2
Gjb1P28230 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.54□□□□□ -2
Gjb1P28230 Gm24977-201ENSMUST00000083106 163 ntBASIC2.54□□□□□ -2
Gjb1P28230 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gjb1P28230 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Gjb1P28230 Gm24280-201ENSMUST00000104237 134 ntBASIC2.53□□□□□ -2
Gjb1P28230 Gm24440-201ENSMUST00000157236 63 ntBASIC2.53□□□□□ -2
Gjb1P28230 Mir1967-201ENSMUST00000157789 82 ntBASIC2.53□□□□□ -2
Gjb1P28230 Gm24512-201ENSMUST00000174963 65 ntBASIC2.53□□□□□ -2
Gjb1P28230 Gm24813-201ENSMUST00000175310 84 ntBASIC2.53□□□□□ -2
Gjb1P28230 Mir28b-201ENSMUST00000175399 80 ntBASIC2.53□□□□□ -2
Gjb1P28230 Gm44482-201ENSMUST00000199232 103 ntBASIC2.53□□□□□ -2
Gjb1P28230 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.53□□□□□ -2
Gjb1P28230 Gm44903-201ENSMUST00000206840 130 ntBASIC2.53□□□□□ -2
Gjb1P28230 Gm26922-201ENSMUST00000082687 72 ntBASIC2.53□□□□□ -2
Gjb1P28230 Gm22972-201ENSMUST00000083297 131 ntBASIC2.53□□□□□ -2
Gjb1P28230 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.53□□□□□ -2.01
Gjb1P28230 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Gjb1P28230 Gm26135-201ENSMUST00000101993 72 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Gjb1P28230 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Gjb1P28230 Gm22217-201ENSMUST00000157556 313 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm24010-201ENSMUST00000157731 282 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm25834-201ENSMUST00000158916 101 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm17161-201ENSMUST00000169187 524 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Snord50b-201ENSMUST00000178497 72 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.52□□□□□ -2.01
Gjb1P28230 Gm28169-201ENSMUST00000190342 345 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm43563-201ENSMUST00000196761 198 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm44182-201ENSMUST00000204052 115 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm23461-201ENSMUST00000083265 107 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm25124-201ENSMUST00000083345 164 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Mir340-201ENSMUST00000083483 98 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.52□□□□□ -2.01
Gjb1P28230 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Gjb1P28230 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Gjb1P28230 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Gjb1P28230 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.51□□□□□ -2.01
Gjb1P28230 Gm17052-201ENSMUST00000165496 289 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm17113-201ENSMUST00000170118 171 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm24638-201ENSMUST00000179807 132 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.51□□□□□ -2.01
Gjb1P28230 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm43626-201ENSMUST00000198575 162 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm19118-201ENSMUST00000222554 98 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Snora19-201ENSMUST00000082962 132 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm26493-201ENSMUST00000083155 136 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm23658-201ENSMUST00000083233 132 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.51□□□□□ -2.01
Gjb1P28230 Gm25068-201ENSMUST00000103895 110 ntBASIC2.5□□□□□ -2.01
Gjb1P28230 Snord72-201ENSMUST00000104549 81 ntBASIC2.5□□□□□ -2.01
Gjb1P28230 Gm22483-201ENSMUST00000157986 274 ntBASIC2.5□□□□□ -2.01
Gjb1P28230 Gm23858-201ENSMUST00000158384 106 ntBASIC2.5□□□□□ -2.01
Gjb1P28230 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Gjb1P28230 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Gjb1P28230 Gm24304-201ENSMUST00000177635 107 ntBASIC2.5□□□□□ -2.01
Gjb1P28230 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Gjb1P28230 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
Gjb1P28230 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.5□□□□□ -2.01
Gjb1P28230 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.5□□□□□ -2.01
Gjb1P28230 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Gjb1P28230 Gm10360-201ENSMUST00000097219 272 ntBASIC2.5□□□□□ -2.01
Gjb1P28230 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Gjb1P28230 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Gjb1P28230 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Gjb1P28230 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gjb1P28230 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Gjb1P28230 Gm24598-201ENSMUST00000122510 74 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Gm25424-201ENSMUST00000157612 58 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Gm26024-201ENSMUST00000158657 322 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Gm44564-201ENSMUST00000207985 180 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Gm45445-201ENSMUST00000209586 232 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Gm22248-201ENSMUST00000082482 150 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Snord104-201ENSMUST00000083192 70 ntBASIC2.49□□□□□ -2.01
Gjb1P28230 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Gjb1P28230 Mir301b-201ENSMUST00000102333 97 ntBASIC2.48□□□□□ -2.01
Gjb1P28230 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Gjb1P28230 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.48□□□□□ -2.01
Gjb1P28230 Gm23324-201ENSMUST00000157421 131 ntBASIC2.48□□□□□ -2.01
Gjb1P28230 Gm25910-201ENSMUST00000157620 140 ntBASIC2.48□□□□□ -2.01
Gjb1P28230 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.48□□□□□ -2.01
Gjb1P28230 Gm45002-201ENSMUST00000208045 120 ntBASIC2.48□□□□□ -2.01
Gjb1P28230 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.48□□□□□ -2.01
Gjb1P28230 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.48□□□□□ -2.01
Gjb1P28230 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
Gjb1P28230 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.48□□□□□ -2.01
Gjb1P28230 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Gjb1P28230 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Gjb1P28230 Gm23223-201ENSMUST00000158119 127 ntBASIC2.47□□□□□ -2.01
Gjb1P28230 Gm25935-201ENSMUST00000178746 107 ntBASIC2.47□□□□□ -2.01
Gjb1P28230 Gm26435-201ENSMUST00000179026 107 ntBASIC2.47□□□□□ -2.01
Gjb1P28230 Gm27585-201ENSMUST00000183717 199 ntBASIC2.47□□□□□ -2.01
Gjb1P28230 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.47□□□□□ -2.01
Gjb1P28230 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.46□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms