Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Sdc1P18828 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Gm24810-201ENSMUST00000175317 70 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Sdc1P18828 Mir7063-201ENSMUST00000184158 91 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Gm29022-201ENSMUST00000190702 225 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Gm38274-201ENSMUST00000195689 148 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Gm44387-201ENSMUST00000196298 145 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Gm25851-201ENSMUST00000082794 107 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.82□□□□□ -2.28
Sdc1P18828 Gm24818-201ENSMUST00000175093 161 ntBASIC0.82□□□□□ -2.28
Sdc1P18828 Gm24020-201ENSMUST00000180156 108 ntBASIC0.82□□□□□ -2.28
Sdc1P18828 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Sdc1P18828 Gm44358-201ENSMUST00000196301 98 ntBASIC0.82□□□□□ -2.28
Sdc1P18828 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.82□□□□□ -2.28
Sdc1P18828 Gm22884-201ENSMUST00000083127 140 ntBASIC0.82□□□□□ -2.28
Sdc1P18828 Snord35a-201ENSMUST00000083884 90 ntBASIC0.82□□□□□ -2.28
Sdc1P18828 Gm11794-201ENSMUST00000119446 237 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Sdc1P18828 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Sdc1P18828 Gm22791-201ENSMUST00000157232 145 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 Gm23114-201ENSMUST00000158478 117 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 Gm25750-201ENSMUST00000175483 112 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 Gm37713-201ENSMUST00000191746 198 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Sdc1P18828 Gm43367-201ENSMUST00000199986 625 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 Mir22-201ENSMUST00000083595 95 ntBASIC0.81□□□□□ -2.28
Sdc1P18828 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Sdc1P18828 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Sdc1P18828 Gm12512-201ENSMUST00000119620 217 ntBASIC0.8□□□□□ -2.28
Sdc1P18828 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Sdc1P18828 Gm27545-201ENSMUST00000184755 202 ntBASIC0.8□□□□□ -2.28
Sdc1P18828 Mir3569-201ENSMUST00000185080 58 ntBASIC0.8□□□□□ -2.28
Sdc1P18828 Gm43250-201ENSMUST00000196536 273 ntBASIC0.8□□□□□ -2.28
Sdc1P18828 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.8□□□□□ -2.28
Sdc1P18828 Gm45543-201ENSMUST00000209327 88 ntBASIC0.8□□□□□ -2.28
Sdc1P18828 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.8□□□□□ -2.28
Sdc1P18828 Gm25650-201ENSMUST00000083784 162 ntBASIC0.8□□□□□ -2.28
Sdc1P18828 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Sdc1P18828 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Sdc1P18828 Gm26135-201ENSMUST00000101993 72 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm25832-201ENSMUST00000104140 130 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm15162-201ENSMUST00000119325 283 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm14846-201ENSMUST00000121868 216 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm23232-201ENSMUST00000157300 105 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm23893-201ENSMUST00000158106 134 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm23542-201ENSMUST00000158208 96 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm25011-201ENSMUST00000158398 126 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm23289-201ENSMUST00000175615 108 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Snord50b-201ENSMUST00000178497 72 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Sdc1P18828 Gm19123-201ENSMUST00000190716 651 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm26056-201ENSMUST00000083043 104 ntBASIC0.79□□□□□ -2.28
Sdc1P18828 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Sdc1P18828 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.78□□□□□ -2.28
Sdc1P18828 Gm22215-201ENSMUST00000157558 96 ntBASIC0.78□□□□□ -2.28
Sdc1P18828 Gm22515-201ENSMUST00000158273 305 ntBASIC0.78□□□□□ -2.28
Sdc1P18828 Gm27974-201ENSMUST00000183415 105 ntBASIC0.78□□□□□ -2.28
Sdc1P18828 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.78□□□□□ -2.28
Sdc1P18828 Gm28288-201ENSMUST00000191019 214 ntBASIC0.78□□□□□ -2.28
Sdc1P18828 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.78□□□□□ -2.28
Sdc1P18828 Gm23625-201ENSMUST00000082457 100 ntBASIC0.78□□□□□ -2.28
Sdc1P18828 Gm26329-201ENSMUST00000093723 110 ntBASIC0.78□□□□□ -2.28
Sdc1P18828 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.78□□□□□ -2.28
Sdc1P18828 Gm24283-201ENSMUST00000104233 107 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Sdc1P18828 Gm15379-201ENSMUST00000121224 648 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm24499-201ENSMUST00000158446 104 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.77□□□□□ -2.29
Sdc1P18828 Gm22802-201ENSMUST00000175621 89 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm7958-201ENSMUST00000178255 468 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm7950-201ENSMUST00000179633 468 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm26914-201ENSMUST00000182262 223 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm10105-201ENSMUST00000184601 270 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm28862-201ENSMUST00000188246 163 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm19777-201ENSMUST00000191940 358 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm43472-201ENSMUST00000200175 154 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm44473-201ENSMUST00000204039 152 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.77□□□□□ -2.29
Sdc1P18828 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.77□□□□□ -2.29
Sdc1P18828 Mir490-201ENSMUST00000093567 84 ntBASIC0.77□□□□□ -2.29
Sdc1P18828 Gm22689-201ENSMUST00000102452 110 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm26080-201ENSMUST00000104069 131 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm23083-201ENSMUST00000157851 116 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm26401-201ENSMUST00000158502 76 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm23921-201ENSMUST00000175258 107 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm27540-201ENSMUST00000184950 187 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Sdc1P18828 Mir7661-201ENSMUST00000197023 61 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm44396-201ENSMUST00000199843 114 ntBASIC0.76□□□□□ -2.29
Sdc1P18828 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.76□□□□□ -2.29
Sdc1P18828 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms