Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 Gm27926-201ENSMUST00000157180 66 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 Gm22515-201ENSMUST00000158273 305 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 Gm25166-201ENSMUST00000158909 111 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 Gm17148-201ENSMUST00000164702 249 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 Gm24799-201ENSMUST00000178431 79 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 Gm10264-201ENSMUST00000220589 429 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 Gm25801-201ENSMUST00000082638 106 ntBASIC0.81□□□□□ -2.28
Cdx1P18111 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Cdx1P18111 Gm22469-201ENSMUST00000104118 133 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Gm22199-201ENSMUST00000122660 126 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Cfap61-214ENSMUST00000167179 183 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Gm26968-201ENSMUST00000182894 481 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Gm28661-201ENSMUST00000188231 681 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx1P18111 Gm8125-201ENSMUST00000216602 738 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Gm25579-201ENSMUST00000083407 106 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Mir10b-201ENSMUST00000083566 68 ntBASIC0.8□□□□□ -2.28
Cdx1P18111 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
Cdx1P18111 Gm26500-201ENSMUST00000101867 106 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm14296-202ENSMUST00000108931 750 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Snord98-201ENSMUST00000116819 65 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm12143-201ENSMUST00000119666 332 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Cdx1P18111 Gm25884-201ENSMUST00000157782 62 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm24401-201ENSMUST00000157868 91 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm23114-201ENSMUST00000158478 117 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm23022-201ENSMUST00000158768 180 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm26180-201ENSMUST00000179942 107 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm17067-202ENSMUST00000180131 123 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm29022-201ENSMUST00000190702 225 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm37128-201ENSMUST00000192599 232 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.79□□□□□ -2.28
Cdx1P18111 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.79□□□□□ -2.28
Cdx1P18111 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Cdx1P18111 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Cdx1P18111 Gm25851-201ENSMUST00000082794 107 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm25789-201ENSMUST00000083294 76 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Gm25650-201ENSMUST00000083784 162 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.79□□□□□ -2.28
Cdx1P18111 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Cdx1P18111 Gm25506-201ENSMUST00000104339 70 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Gm23991-201ENSMUST00000117033 93 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Gm11522-201ENSMUST00000120533 176 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Gm2962-201ENSMUST00000159266 336 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Cdx1P18111 Gm27236-201ENSMUST00000184147 442 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Gm43602-201ENSMUST00000196772 300 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.78□□□□□ -2.28
Cdx1P18111 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Gm24037-201ENSMUST00000082871 180 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Gm26164-201ENSMUST00000083793 104 ntBASIC0.78□□□□□ -2.28
Cdx1P18111 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
Cdx1P18111 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Cdx1P18111 Gm11835-201ENSMUST00000120635 663 ntBASIC0.77□□□□□ -2.29
Cdx1P18111 Gm26401-201ENSMUST00000158502 76 ntBASIC0.77□□□□□ -2.29
Cdx1P18111 Gm24277-201ENSMUST00000158661 104 ntBASIC0.77□□□□□ -2.29
Cdx1P18111 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.77□□□□□ -2.29
Cdx1P18111 Gm20386-201ENSMUST00000174010 132 ntBASIC0.77□□□□□ -2.29
Cdx1P18111 Mir6381-201ENSMUST00000183426 87 ntBASIC0.77□□□□□ -2.29
Cdx1P18111 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.77□□□□□ -2.29
Cdx1P18111 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.77□□□□□ -2.29
Cdx1P18111 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.77□□□□□ -2.29
Cdx1P18111 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
Cdx1P18111 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.76□□□□□ -2.29
Cdx1P18111 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm24271-201ENSMUST00000102327 111 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm14846-201ENSMUST00000121868 216 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Cdx1P18111 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Cdx1P18111 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Cdx1P18111 Gm23169-201ENSMUST00000157157 112 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm22555-201ENSMUST00000157801 62 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm22113-201ENSMUST00000158343 104 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm22802-201ENSMUST00000175621 89 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm24308-201ENSMUST00000177773 114 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm20257-202ENSMUST00000188643 130 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm44010-201ENSMUST00000204432 331 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm25578-201ENSMUST00000083406 104 ntBASIC0.76□□□□□ -2.29
Cdx1P18111 Gm26339-201ENSMUST00000102368 99 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Cdx1P18111 Mir1b-201ENSMUST00000117012 122 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm11248-201ENSMUST00000119568 201 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.75□□□□□ -2.29
Cdx1P18111 Gm22279-201ENSMUST00000157200 93 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm24618-201ENSMUST00000177718 94 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm23953-201ENSMUST00000178214 94 ntBASIC0.75□□□□□ -2.29
Cdx1P18111 Gm26332-201ENSMUST00000179813 94 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms