Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Col1a1P11087 Gm22508-201ENSMUST00000082772 110 ntBASIC0.02□□□□□ -2.41
Col1a1P11087 Gm22575-201ENSMUST00000082981 110 ntBASIC0.02□□□□□ -2.41
Col1a1P11087 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Col1a1P11087 Gm22831-201ENSMUST00000102473 109 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Gm13475-201ENSMUST00000119290 234 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Gm12433-201ENSMUST00000119659 255 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Col1a1P11087 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Col1a1P11087 Gm24897-201ENSMUST00000179033 107 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Gm25253-201ENSMUST00000179958 107 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Gm28661-201ENSMUST00000188231 681 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Mir468-201ENSMUST00000197332 78 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Gm44488-201ENSMUST00000199467 119 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.01□□□□□ -2.41
Col1a1P11087 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.01□□□□□ -2.41
Col1a1P11087 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.01□□□□□ -2.41
Col1a1P11087 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Gm22884-201ENSMUST00000083127 140 ntBASIC0.01□□□□□ -2.41
Col1a1P11087 Gm22279-201ENSMUST00000157200 93 ntBASIC0□□□□□ -2.41
Col1a1P11087 Gm22077-201ENSMUST00000157594 93 ntBASIC0□□□□□ -2.41
Col1a1P11087 Gm25558-201ENSMUST00000158083 106 ntBASIC0□□□□□ -2.41
Col1a1P11087 Gm27610-201ENSMUST00000184026 74 ntBASIC0□□□□□ -2.41
Col1a1P11087 Gm44455-201ENSMUST00000200061 82 ntBASIC0□□□□□ -2.41
Col1a1P11087 Gm20144-201ENSMUST00000203031 165 ntBASIC0□□□□□ -2.41
Col1a1P11087 Gm43993-201ENSMUST00000203972 247 ntBASIC0□□□□□ -2.41
Col1a1P11087 AC163033.1-201ENSMUST00000218608 157 ntBASIC0□□□□□ -2.41
Col1a1P11087 AC104832.1-201ENSMUST00000222938 550 ntBASIC0□□□□□ -2.41
Col1a1P11087 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
Col1a1P11087 Snord82-201ENSMUST00000082889 70 ntBASIC0□□□□□ -2.41
Col1a1P11087 Gm24456-201ENSMUST00000083198 107 ntBASIC0□□□□□ -2.41
Col1a1P11087 Gm24523-201ENSMUST00000083965 132 ntBASIC0□□□□□ -2.41
Col1a1P11087 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Col1a1P11087 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.01□□□□□ -2.41
Col1a1P11087 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.01□□□□□ -2.41
Col1a1P11087 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.01□□□□□ -2.41
Col1a1P11087 Gm42475-201ENSMUST00000201212 295 ntBASIC-0.01□□□□□ -2.41
Col1a1P11087 Gm44909-201ENSMUST00000208756 165 ntBASIC-0.01□□□□□ -2.41
Col1a1P11087 AC162931.1-201ENSMUST00000214184 267 ntBASIC-0.01□□□□□ -2.41
Col1a1P11087 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.01□□□□□ -2.41
Col1a1P11087 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.01□□□□□ -2.41
Col1a1P11087 Gm22786-201ENSMUST00000104086 122 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Gm15379-201ENSMUST00000121224 648 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Gm22597-201ENSMUST00000157602 80 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Col1a1P11087 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Gm21894-201ENSMUST00000179631 546 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Gm20923-201ENSMUST00000190009 319 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Gm21088-201ENSMUST00000190875 316 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Gm26265-202ENSMUST00000196326 133 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC-0.02□□□□□ -2.41
Col1a1P11087 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
Col1a1P11087 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-0.02□□□□□ -2.41
Col1a1P11087 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm12779-201ENSMUST00000121496 143 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm25384-201ENSMUST00000157807 105 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm27365-201ENSMUST00000184041 177 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm44337-201ENSMUST00000196553 114 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm42164-201ENSMUST00000198881 379 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm32300-201ENSMUST00000221735 515 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 AC130821.1-201ENSMUST00000221997 293 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm14638-201ENSMUST00000121338 216 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Mir1961-201ENSMUST00000158643 112 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Mir1936-201ENSMUST00000158699 93 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm43114-201ENSMUST00000198298 343 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 AC154636.2-201ENSMUST00000222538 161 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 AC165092.3-201ENSMUST00000223602 282 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Gm22809-201ENSMUST00000082743 156 ntBASIC-0.03□□□□□ -2.41
Col1a1P11087 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.04□□□□□ -2.42
Col1a1P11087 Gm25706-201ENSMUST00000157828 247 ntBASIC-0.04□□□□□ -2.42
Col1a1P11087 Gm23542-201ENSMUST00000158208 96 ntBASIC-0.04□□□□□ -2.42
Col1a1P11087 Gm24726-201ENSMUST00000158232 121 ntBASIC-0.04□□□□□ -2.42
Col1a1P11087 Gm29229-201ENSMUST00000188874 323 ntBASIC-0.04□□□□□ -2.42
Col1a1P11087 Gm28414-201ENSMUST00000190111 294 ntBASIC-0.04□□□□□ -2.42
Col1a1P11087 Gm44325-201ENSMUST00000196757 77 ntBASIC-0.04□□□□□ -2.42
Col1a1P11087 Gm23503-201ENSMUST00000083903 107 ntBASIC-0.04□□□□□ -2.42
Col1a1P11087 Gm4746-201ENSMUST00000120395 2406 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm26002-201ENSMUST00000101915 107 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm22935-201ENSMUST00000103960 104 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Mir466n-201ENSMUST00000104798 94 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm14931-201ENSMUST00000111079 253 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm25783-201ENSMUST00000122525 190 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm23000-201ENSMUST00000157083 139 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm22764-201ENSMUST00000158370 92 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm27236-201ENSMUST00000184147 442 ntBASIC-0.05□□□□□ -2.42
Col1a1P11087 Gm28740-201ENSMUST00000186142 215 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms