Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm22062-201ENSMUST00000082563 107 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm24152-201ENSMUST00000082764 163 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm23041-201ENSMUST00000083868 106 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Col5a1O88207 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Col5a1O88207 Gm13967-201ENSMUST00000120404 380 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm12785-201ENSMUST00000122052 172 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm24632-201ENSMUST00000122770 323 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm37713-201ENSMUST00000191746 198 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm44337-201ENSMUST00000196553 114 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Mir3068-202ENSMUST00000197755 79 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm44524-201ENSMUST00000203899 271 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.11□□□□□ -2.23
Col5a1O88207 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm25078-201ENSMUST00000082530 107 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm26493-201ENSMUST00000083155 136 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Gm25141-201ENSMUST00000083177 107 ntBASIC1.11□□□□□ -2.23
Col5a1O88207 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Col5a1O88207 Gm23641-201ENSMUST00000157857 101 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm22382-201ENSMUST00000158185 130 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm22527-201ENSMUST00000158816 106 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm25362-201ENSMUST00000158854 105 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm22308-201ENSMUST00000177609 107 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm23933-201ENSMUST00000178405 79 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Mir7241-201ENSMUST00000184532 64 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm28921-201ENSMUST00000190219 378 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm37338-201ENSMUST00000191986 127 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm42570-201ENSMUST00000195937 292 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm45365-201ENSMUST00000209489 256 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.1□□□□□ -2.23
Col5a1O88207 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Col5a1O88207 Gm22997-201ENSMUST00000082845 107 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Col5a1O88207 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
Col5a1O88207 Gm13577-201ENSMUST00000121365 205 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm24895-201ENSMUST00000122742 74 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.1□□□□□ -2.23
Col5a1O88207 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Col5a1O88207 Gm24911-201ENSMUST00000157292 136 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm22215-201ENSMUST00000157558 96 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Snord13-201ENSMUST00000157627 104 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm22113-201ENSMUST00000158343 104 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm24501-201ENSMUST00000158452 62 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm27521-201ENSMUST00000184022 64 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm18357-201ENSMUST00000188184 580 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Trbv6-201ENSMUST00000193743 276 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm37361-201ENSMUST00000194345 132 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.1□□□□□ -2.23
Col5a1O88207 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Col5a1O88207 Gm24356-201ENSMUST00000082859 106 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Mir93-201ENSMUST00000083593 88 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Mir32-201ENSMUST00000083610 70 ntBASIC1.1□□□□□ -2.23
Col5a1O88207 Gm24116-201ENSMUST00000103975 107 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm25875-201ENSMUST00000104323 107 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm15365-201ENSMUST00000122392 300 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm25805-201ENSMUST00000122788 108 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Col5a1O88207 Gm23640-201ENSMUST00000157860 104 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm23852-201ENSMUST00000158376 77 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm25368-201ENSMUST00000158847 131 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Mir7116-201ENSMUST00000195956 70 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm43286-201ENSMUST00000197420 424 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm44429-201ENSMUST00000203542 186 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Col5a1O88207 Gm23246-201ENSMUST00000083371 67 ntBASIC1.09□□□□□ -2.23
Col5a1O88207 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Col5a1O88207 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Col5a1O88207 Mir1b-201ENSMUST00000117012 122 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm22027-201ENSMUST00000122737 127 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Col5a1O88207 Gm23982-201ENSMUST00000157141 106 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm23759-201ENSMUST00000158351 268 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm22675-201ENSMUST00000158430 104 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.08□□□□□ -2.24
Col5a1O88207 Mir6375-201ENSMUST00000197176 95 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.08□□□□□ -2.24
Col5a1O88207 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm23625-201ENSMUST00000082457 100 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm22358-201ENSMUST00000082877 122 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm22294-201ENSMUST00000083308 104 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.08□□□□□ -2.24
Col5a1O88207 Gm25188-201ENSMUST00000083913 122 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms