Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm22888-201ENSMUST00000158640 77 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm29352-201ENSMUST00000188054 544 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm28414-201ENSMUST00000190111 294 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.82□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.83□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm20543-201ENSMUST00000174200 726 ntBASIC-0.83□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm43556-201ENSMUST00000196186 681 ntBASIC-0.83□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.83□□□□□ -2.54
Trav4-3A0A0B4J1K1 Mir183-201ENSMUST00000083685 70 ntBASIC-0.83□□□□□ -2.54
Trav4-3A0A0B4J1K1 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm25294-201ENSMUST00000122791 104 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm23538-201ENSMUST00000157535 101 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm23078-201ENSMUST00000157848 148 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm23068-201ENSMUST00000158239 293 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm25156-201ENSMUST00000179809 79 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Mir6411-201ENSMUST00000183556 108 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm24966-201ENSMUST00000082443 79 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Gm24610-201ENSMUST00000083270 109 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.84□□□□□ -2.54
Trav4-3A0A0B4J1K1 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm17132-201ENSMUST00000109542 1158 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm36953-201ENSMUST00000195295 268 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 AC116465.1-201ENSMUST00000220324 235 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 AC159621.1-201ENSMUST00000223249 163 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Mir410-201ENSMUST00000083563 81 ntBASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-0.85□□□□□ -2.55
Trav4-3A0A0B4J1K1 Mir880-201ENSMUST00000104809 78 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm14765-201ENSMUST00000121954 326 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm24784-201ENSMUST00000157640 62 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Mir3473a-201ENSMUST00000175011 78 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm7258-201ENSMUST00000179317 300 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 AC153957.1-201ENSMUST00000215235 229 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Mir19a-201ENSMUST00000083482 82 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Rny1-201ENSMUST00000083767 112 ntBASIC-0.86□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm11575-201ENSMUST00000122243 228 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm24439-201ENSMUST00000157894 117 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm24168-201ENSMUST00000178825 107 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm27342-201ENSMUST00000183530 109 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm28299-201ENSMUST00000189908 339 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm44865-201ENSMUST00000207240 531 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm44870-201ENSMUST00000207291 357 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 AC159246.1-201ENSMUST00000214478 249 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 AC069561.2-201ENSMUST00000217596 420 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Mir421-201ENSMUST00000083575 76 ntBASIC-0.87□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.88□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.88□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm25361-201ENSMUST00000179358 76 ntBASIC-0.88□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm24464-201ENSMUST00000179697 107 ntBASIC-0.88□□□□□ -2.55
Trav4-3A0A0B4J1K1 Mir6382-201ENSMUST00000184055 110 ntBASIC-0.88□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm44337-201ENSMUST00000196553 114 ntBASIC-0.88□□□□□ -2.55
Trav4-3A0A0B4J1K1 AC125167.1-201ENSMUST00000198698 141 ntBASIC-0.88□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm44282-201ENSMUST00000203199 190 ntBASIC-0.88□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm13804-201ENSMUST00000119552 172 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm12881-201ENSMUST00000121191 203 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm24880-201ENSMUST00000158776 85 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm22111-201ENSMUST00000178010 79 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23687-201ENSMUST00000178664 79 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm24566-201ENSMUST00000179286 79 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm23305-201ENSMUST00000179342 79 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm26389-201ENSMUST00000179819 79 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm22130-201ENSMUST00000179979 79 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm22393-201ENSMUST00000180153 79 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 Gm25085-201ENSMUST00000180298 79 ntBASIC-0.89□□□□□ -2.55
Trav4-3A0A0B4J1K1 AC158142.3-201ENSMUST00000226230 675 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms