Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm22664-201ENSMUST00000158719 105 ntBASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm29229-201ENSMUST00000188874 323 ntBASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Mir490-201ENSMUST00000093567 84 ntBASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.52□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm23130-201ENSMUST00000104252 74 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm15379-201ENSMUST00000121224 648 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm25052-201ENSMUST00000122661 158 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm24747-201ENSMUST00000157835 87 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm23996-201ENSMUST00000158062 131 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm29490-201ENSMUST00000190923 342 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm44320-201ENSMUST00000199276 86 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm24163-201ENSMUST00000093660 132 ntBASIC0.51□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm14846-201ENSMUST00000121868 216 ntBASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm15899-201ENSMUST00000128586 238 ntBASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm25284-201ENSMUST00000180345 141 ntBASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm28794-201ENSMUST00000185276 136 ntBASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm25579-201ENSMUST00000083407 106 ntBASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm22743-201ENSMUST00000083445 133 ntBASIC0.5□□□□□ -2.33
Trav16d-dv11A0A075B617 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm13720-201ENSMUST00000120741 196 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm26393-201ENSMUST00000157625 129 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm26358-201ENSMUST00000158215 97 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm26180-201ENSMUST00000179942 107 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm18291-201ENSMUST00000190791 301 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm25697-201ENSMUST00000082902 98 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Mir27b-201ENSMUST00000083541 73 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm26164-201ENSMUST00000083793 104 ntBASIC0.49□□□□□ -2.33
Trav16d-dv11A0A075B617 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm26135-201ENSMUST00000101993 72 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm23203-201ENSMUST00000104374 107 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm14568-201ENSMUST00000119321 294 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm25434-201ENSMUST00000158278 167 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Snord50b-201ENSMUST00000178497 72 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm20257-202ENSMUST00000188643 130 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm28921-201ENSMUST00000190219 378 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Mir216a-201ENSMUST00000083605 72 ntBASIC0.48□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm23898-201ENSMUST00000158111 103 ntBASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 Mir15a-201ENSMUST00000175266 84 ntBASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm9227-201ENSMUST00000194733 566 ntBASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 DQ267101-201ENSMUST00000082562 73 ntBASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 Snord33-201ENSMUST00000083694 84 ntBASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Trav16d-dv11A0A075B617 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm22656-201ENSMUST00000104199 171 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm16032-201ENSMUST00000118534 168 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm11522-201ENSMUST00000120533 176 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm25909-201ENSMUST00000157619 121 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm24853-201ENSMUST00000158026 121 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm23660-201ENSMUST00000178362 79 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm24088-201ENSMUST00000179100 79 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm27365-201ENSMUST00000184041 177 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm36956-201ENSMUST00000193830 214 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm23721-201ENSMUST00000083005 107 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm25627-201ENSMUST00000084003 153 ntBASIC0.46□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm24579-201ENSMUST00000103964 144 ntBASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm11856-201ENSMUST00000118712 276 ntBASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm13341-201ENSMUST00000120780 672 ntBASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm24678-201ENSMUST00000158756 104 ntBASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm23289-201ENSMUST00000175615 108 ntBASIC0.45□□□□□ -2.34
Trav16d-dv11A0A075B617 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms