Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Mir3961-201ENSMUST00000198795 59 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm24460-201ENSMUST00000082731 106 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm26107-201ENSMUST00000083972 107 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm10222-201ENSMUST00000088336 294 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Mir496a-201ENSMUST00000093627 79 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm22149-201ENSMUST00000104442 136 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm12512-201ENSMUST00000119620 217 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm25543-201ENSMUST00000122678 312 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm24837-201ENSMUST00000158683 81 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm22114-201ENSMUST00000177756 107 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm37713-201ENSMUST00000191746 198 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm24116-201ENSMUST00000103975 107 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm14919-201ENSMUST00000120839 390 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm22447-201ENSMUST00000158155 92 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm22448-201ENSMUST00000179254 107 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm27511-201ENSMUST00000183502 127 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm25078-201ENSMUST00000082530 107 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm26249-201ENSMUST00000116708 118 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm15379-201ENSMUST00000121224 648 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm22027-201ENSMUST00000122737 127 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm22281-201ENSMUST00000157198 103 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm23640-201ENSMUST00000157860 104 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm24573-201ENSMUST00000175499 112 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm37763-201ENSMUST00000193445 120 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm42672-201ENSMUST00000197821 352 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm45207-201ENSMUST00000207469 145 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm45403-201ENSMUST00000209453 276 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm26447-201ENSMUST00000082448 129 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm23055-201ENSMUST00000082805 94 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Mir211-201ENSMUST00000083651 106 ntBASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Scn5aQ9JJV9 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm12785-201ENSMUST00000122052 172 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm8121-201ENSMUST00000153583 499 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Snord13-201ENSMUST00000157627 104 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm22113-201ENSMUST00000158343 104 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm24154-201ENSMUST00000175261 130 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm25397-201ENSMUST00000176951 92 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm22308-201ENSMUST00000177609 107 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm27793-201ENSMUST00000183405 76 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm19901-201ENSMUST00000192191 495 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm42594-201ENSMUST00000199511 246 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm22997-201ENSMUST00000082845 107 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Gm23970-201ENSMUST00000083319 107 ntBASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Scn5aQ9JJV9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm25170-201ENSMUST00000104191 129 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm14296-202ENSMUST00000108931 750 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm14001-201ENSMUST00000118847 247 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm15213-201ENSMUST00000122098 216 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm25961-201ENSMUST00000157174 135 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm28016-201ENSMUST00000184594 196 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm42774-201ENSMUST00000198854 283 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm44353-201ENSMUST00000200618 138 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm44960-201ENSMUST00000207403 141 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Mir151-201ENSMUST00000083678 68 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm24764-201ENSMUST00000083686 199 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm15067-201ENSMUST00000119534 156 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm23858-201ENSMUST00000158384 106 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm25615-201ENSMUST00000177836 94 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm17067-202ENSMUST00000180131 123 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm45673-201ENSMUST00000210293 358 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 Gm22972-201ENSMUST00000083297 131 ntBASIC1.47□□□□□ -2.17
Scn5aQ9JJV9 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.46□□□□□ -2.18
Scn5aQ9JJV9 Gm25054-201ENSMUST00000157370 97 ntBASIC1.46□□□□□ -2.18
Scn5aQ9JJV9 Gm45616-201ENSMUST00000211711 319 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms