Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Mir875-201ENSMUST00000104698 78 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm13433-201ENSMUST00000121701 240 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm22321-201ENSMUST00000157152 104 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm22768-201ENSMUST00000158366 153 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm25362-201ENSMUST00000158854 105 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm17161-201ENSMUST00000169187 524 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm22118-201ENSMUST00000175593 171 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm43865-201ENSMUST00000204721 127 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Mir151-201ENSMUST00000083678 68 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Snora33-201ENSMUST00000093556 129 ntBASIC1.8□□□□□ -2.12
Ddx28Q9CWT6 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm26135-201ENSMUST00000101993 72 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm24079-201ENSMUST00000104352 132 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm12512-201ENSMUST00000119620 217 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm14792-201ENSMUST00000119725 258 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Snord50b-201ENSMUST00000178497 72 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Mir6997-201ENSMUST00000184313 71 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm27979-201ENSMUST00000185126 56 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm25820-202ENSMUST00000197479 128 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm42774-201ENSMUST00000198854 283 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm45754-201ENSMUST00000212380 279 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm9795-201ENSMUST00000062156 693 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm24966-201ENSMUST00000082443 79 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm25813-201ENSMUST00000082748 191 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm24151-201ENSMUST00000082758 141 ntBASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Ddx28Q9CWT6 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm25485-201ENSMUST00000104120 132 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm24283-201ENSMUST00000104233 107 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm23492-201ENSMUST00000116837 115 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm13711-201ENSMUST00000119708 453 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm16328-201ENSMUST00000126985 196 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm24909-201ENSMUST00000157290 280 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Mir1949-201ENSMUST00000157434 141 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm24478-201ENSMUST00000157439 158 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 U6.1-201ENSMUST00000157443 101 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Rnu7-201ENSMUST00000158458 62 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm16162-201ENSMUST00000162296 297 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm25994-201ENSMUST00000175392 101 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm27747-201ENSMUST00000184707 85 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm29140-201ENSMUST00000190187 476 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm26495-201ENSMUST00000083152 137 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm23451-201ENSMUST00000083328 122 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm24412-201ENSMUST00000083426 109 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.78□□□□□ -2.12
Ddx28Q9CWT6 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Gm22935-201ENSMUST00000103960 104 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Gm15379-201ENSMUST00000121224 648 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Gm22603-201ENSMUST00000157603 96 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Mir6379-201ENSMUST00000183392 115 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Mir6901-201ENSMUST00000185062 62 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Gm23039-201ENSMUST00000083870 161 ntBASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Ddx28Q9CWT6 Gm15067-201ENSMUST00000119534 156 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Gm24632-201ENSMUST00000122770 323 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Gm23854-201ENSMUST00000158378 108 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Gm25653-201ENSMUST00000158473 138 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Mir3086-201ENSMUST00000175072 87 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Gm9156-201ENSMUST00000189660 463 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Gm44959-201ENSMUST00000209127 231 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.76□□□□□ -2.13
Ddx28Q9CWT6 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Gm25090-201ENSMUST00000104000 132 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Gm14491-201ENSMUST00000121919 199 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Trav20-201ENSMUST00000142754 347 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Gm22386-201ENSMUST00000158192 129 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Gm25658-201ENSMUST00000158472 128 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Mir6388-201ENSMUST00000184417 75 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Gm44353-201ENSMUST00000200618 138 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Gm44977-201ENSMUST00000205283 420 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.75□□□□□ -2.13
Ddx28Q9CWT6 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm14922-201ENSMUST00000121131 163 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms