Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm28409-201ENSMUST00000187064 103 ntBASIC3.28□□□□□ -1.88
Clp1Q99LI9 Gm42623-201ENSMUST00000197225 379 ntBASIC3.28□□□□□ -1.88
Clp1Q99LI9 Gm43991-201ENSMUST00000203751 274 ntBASIC3.28□□□□□ -1.88
Clp1Q99LI9 Gm45386-201ENSMUST00000210194 218 ntBASIC3.28□□□□□ -1.88
Clp1Q99LI9 Mir186-201ENSMUST00000083497 71 ntBASIC3.28□□□□□ -1.88
Clp1Q99LI9 Mir29c-201ENSMUST00000083614 88 ntBASIC3.28□□□□□ -1.88
Clp1Q99LI9 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Clp1Q99LI9 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.28□□□□□ -1.89
Clp1Q99LI9 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Clp1Q99LI9 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Clp1Q99LI9 Gm22373-201ENSMUST00000104584 89 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Gm22850-201ENSMUST00000157714 82 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Gm25476-201ENSMUST00000175125 185 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Mir8096-201ENSMUST00000184526 127 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Gm21064-202ENSMUST00000190583 278 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Gm44326-201ENSMUST00000198226 101 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Gm44338-201ENSMUST00000198614 110 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Gm19118-201ENSMUST00000222554 98 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Gm25513-201ENSMUST00000083861 162 ntBASIC3.27□□□□□ -1.89
Clp1Q99LI9 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Clp1Q99LI9 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Clp1Q99LI9 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Clp1Q99LI9 Gm23911-201ENSMUST00000104596 134 ntBASIC3.26□□□□□ -1.89
Clp1Q99LI9 Gm14602-201ENSMUST00000118625 340 ntBASIC3.26□□□□□ -1.89
Clp1Q99LI9 Gm23983-201ENSMUST00000157142 114 ntBASIC3.26□□□□□ -1.89
Clp1Q99LI9 Gm22967-201ENSMUST00000157956 239 ntBASIC3.26□□□□□ -1.89
Clp1Q99LI9 Gm24054-201ENSMUST00000158619 105 ntBASIC3.26□□□□□ -1.89
Clp1Q99LI9 Gm18486-201ENSMUST00000184040 298 ntBASIC3.26□□□□□ -1.89
Clp1Q99LI9 Gm37377-201ENSMUST00000191733 304 ntBASIC3.26□□□□□ -1.89
Clp1Q99LI9 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.26□□□□□ -1.89
Clp1Q99LI9 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Clp1Q99LI9 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Clp1Q99LI9 Gm25526-201ENSMUST00000104332 132 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 Gm24605-201ENSMUST00000104772 96 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 Gm25270-201ENSMUST00000122606 138 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.25□□□□□ -1.89
Clp1Q99LI9 Gm22141-201ENSMUST00000157403 277 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 Gm29603-201ENSMUST00000186792 334 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 Gm37116-201ENSMUST00000195161 147 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 Gm18502-201ENSMUST00000218679 199 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.25□□□□□ -1.89
Clp1Q99LI9 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Clp1Q99LI9 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Clp1Q99LI9 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Clp1Q99LI9 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm24632-201ENSMUST00000122770 323 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm23043-201ENSMUST00000157890 109 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm24930-201ENSMUST00000158315 83 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Rnu7-201ENSMUST00000158458 62 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm23337-201ENSMUST00000158959 118 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm25814-201ENSMUST00000082754 107 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Snord7-201ENSMUST00000083781 97 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm10351-201ENSMUST00000087694 125 ntBASIC3.24□□□□□ -1.89
Clp1Q99LI9 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Clp1Q99LI9 Gm23651-201ENSMUST00000116755 120 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.23□□□□□ -1.89
Clp1Q99LI9 Gm25825-201ENSMUST00000157091 124 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 Gm25371-201ENSMUST00000158162 101 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 Gm26360-201ENSMUST00000158872 103 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 Gm38364-201ENSMUST00000191814 179 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Clp1Q99LI9 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Clp1Q99LI9 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Clp1Q99LI9 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 Gm25812-201ENSMUST00000082751 103 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 Mir155-201ENSMUST00000083463 65 ntBASIC3.23□□□□□ -1.89
Clp1Q99LI9 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Clp1Q99LI9 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Clp1Q99LI9 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.22□□□□□ -1.89
Clp1Q99LI9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm12723-201ENSMUST00000120700 451 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm26049-201ENSMUST00000157313 108 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm23277-201ENSMUST00000157914 136 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm22510-201ENSMUST00000179304 79 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm26336-201ENSMUST00000179449 79 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm26390-201ENSMUST00000179628 79 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm27991-201ENSMUST00000184804 137 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm43521-201ENSMUST00000197838 255 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Gm43107-201ENSMUST00000198729 255 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Mir7215-201ENSMUST00000200383 51 ntBASIC3.22□□□□□ -1.89
Clp1Q99LI9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Clp1Q99LI9 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Clp1Q99LI9 Gm11253-201ENSMUST00000118486 201 ntBASIC3.21□□□□□ -1.9
Clp1Q99LI9 Gm23716-201ENSMUST00000157348 144 ntBASIC3.21□□□□□ -1.9
Clp1Q99LI9 Gm44491-201ENSMUST00000196794 96 ntBASIC3.21□□□□□ -1.9
Clp1Q99LI9 Gm43587-201ENSMUST00000199590 204 ntBASIC3.21□□□□□ -1.9
Clp1Q99LI9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.21□□□□□ -1.9
Clp1Q99LI9 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Clp1Q99LI9 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Clp1Q99LI9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Clp1Q99LI9 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Clp1Q99LI9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms