Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm17067-202ENSMUST00000180131 123 ntBASIC0.88□□□□□ -2.27
Chrna3Q8R4G9 Gm22863-201ENSMUST00000180265 94 ntBASIC0.88□□□□□ -2.27
Chrna3Q8R4G9 Gm27919-201ENSMUST00000185163 107 ntBASIC0.88□□□□□ -2.27
Chrna3Q8R4G9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.88□□□□□ -2.27
Chrna3Q8R4G9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.88□□□□□ -2.27
Chrna3Q8R4G9 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.88□□□□□ -2.27
Chrna3Q8R4G9 Gm23055-201ENSMUST00000082805 94 ntBASIC0.88□□□□□ -2.27
Chrna3Q8R4G9 Gm23435-201ENSMUST00000157183 156 ntBASIC0.87□□□□□ -2.27
Chrna3Q8R4G9 Gm22279-201ENSMUST00000157200 93 ntBASIC0.87□□□□□ -2.27
Chrna3Q8R4G9 Gm37128-201ENSMUST00000192599 232 ntBASIC0.87□□□□□ -2.27
Chrna3Q8R4G9 Gm11351-202ENSMUST00000225724 478 ntBASIC0.87□□□□□ -2.27
Chrna3Q8R4G9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm23766-201ENSMUST00000103894 80 ntBASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm11891-201ENSMUST00000121241 619 ntBASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm25052-201ENSMUST00000122661 158 ntBASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm25976-201ENSMUST00000158695 130 ntBASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm9795-201ENSMUST00000062156 693 ntBASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm25851-201ENSMUST00000082794 107 ntBASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm23041-201ENSMUST00000083868 106 ntBASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.86□□□□□ -2.27
Chrna3Q8R4G9 Gm14293-201ENSMUST00000118528 577 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm11389-201ENSMUST00000121407 430 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm24379-201ENSMUST00000122695 86 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm25884-201ENSMUST00000157782 62 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm23340-201ENSMUST00000158955 123 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm27236-201ENSMUST00000184147 442 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm27587-201ENSMUST00000185116 163 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm20144-201ENSMUST00000203031 165 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm44010-201ENSMUST00000204432 331 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm24966-201ENSMUST00000082443 79 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm25801-201ENSMUST00000082638 106 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm24152-201ENSMUST00000082764 163 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Gm24356-201ENSMUST00000082859 106 ntBASIC0.85□□□□□ -2.27
Chrna3Q8R4G9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm22673-201ENSMUST00000104415 131 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Mir1b-201ENSMUST00000117012 122 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm25011-201ENSMUST00000158398 126 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm26430-201ENSMUST00000178054 107 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Mir7j-201ENSMUST00000184427 122 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm37713-201ENSMUST00000191746 198 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm37801-201ENSMUST00000194754 274 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm42855-201ENSMUST00000197388 253 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm25789-201ENSMUST00000083294 76 ntBASIC0.84□□□□□ -2.27
Chrna3Q8R4G9 Gm25559-201ENSMUST00000157182 74 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Gm27545-201ENSMUST00000184755 202 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Gm28661-201ENSMUST00000188231 681 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.83□□□□□ -2.28
Chrna3Q8R4G9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Gm26393-201ENSMUST00000157625 129 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Gm22113-201ENSMUST00000158343 104 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Gm29013-201ENSMUST00000187431 237 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Gm28648-201ENSMUST00000190092 343 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Mir155-201ENSMUST00000083463 65 ntBASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
Chrna3Q8R4G9 Gm22544-201ENSMUST00000104349 127 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Snord71-201ENSMUST00000104361 85 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm22515-201ENSMUST00000158273 305 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm23016-201ENSMUST00000158431 62 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm23114-201ENSMUST00000158478 117 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm24277-201ENSMUST00000158661 104 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm27755-201ENSMUST00000184623 132 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm28992-201ENSMUST00000190534 139 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm42533-201ENSMUST00000196247 157 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm25513-201ENSMUST00000083861 162 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.81□□□□□ -2.28
Chrna3Q8R4G9 Gm26500-201ENSMUST00000101867 106 ntBASIC0.8□□□□□ -2.28
Chrna3Q8R4G9 Gm22689-201ENSMUST00000102452 110 ntBASIC0.8□□□□□ -2.28
Chrna3Q8R4G9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Chrna3Q8R4G9 Gm25274-201ENSMUST00000104296 135 ntBASIC0.8□□□□□ -2.28
Chrna3Q8R4G9 Gm14296-202ENSMUST00000108931 750 ntBASIC0.8□□□□□ -2.28
Chrna3Q8R4G9 Gm11792-201ENSMUST00000120640 168 ntBASIC0.8□□□□□ -2.28
Chrna3Q8R4G9 Gm11334-201ENSMUST00000121969 156 ntBASIC0.8□□□□□ -2.28
Chrna3Q8R4G9 Gm23169-201ENSMUST00000157157 112 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms