Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Gm24132-201ENSMUST00000104745 91 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Gm23535-201ENSMUST00000157542 106 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Gm23209-201ENSMUST00000158667 110 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Gm19901-201ENSMUST00000192191 495 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Gm44352-201ENSMUST00000196358 110 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Gm44182-201ENSMUST00000204052 115 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Gm19790-201ENSMUST00000214414 251 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.81□□□□□ -1.96
Ushbp1Q8R370 Gm24598-201ENSMUST00000122510 74 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Gm25424-201ENSMUST00000157612 58 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Gm22416-201ENSMUST00000158590 88 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Gm24053-201ENSMUST00000158620 105 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Gm25119-201ENSMUST00000158815 88 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Gm43563-201ENSMUST00000196761 198 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Gm42834-201ENSMUST00000196845 256 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Gm44666-201ENSMUST00000208544 391 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Mir384-201ENSMUST00000083565 88 ntBASIC2.8□□□□□ -1.96
Ushbp1Q8R370 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Snora36b-201ENSMUST00000104383 132 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm23803-201ENSMUST00000104610 132 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm23653-201ENSMUST00000116751 97 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm23551-201ENSMUST00000116852 121 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm11786-201ENSMUST00000120799 155 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm23889-201ENSMUST00000122689 104 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm2830-201ENSMUST00000140330 385 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm24440-201ENSMUST00000157236 63 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm25914-201ENSMUST00000157618 153 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm22483-201ENSMUST00000157986 274 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm17528-201ENSMUST00000171026 239 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm24512-201ENSMUST00000174963 65 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm22299-201ENSMUST00000082663 136 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm26126-201ENSMUST00000083188 164 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ushbp1Q8R370 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm25538-201ENSMUST00000101943 107 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Mir767-201ENSMUST00000103256 107 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm24283-201ENSMUST00000104233 107 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm24907-201ENSMUST00000116932 128 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm14652-201ENSMUST00000118479 235 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm15536-201ENSMUST00000121411 114 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm23223-201ENSMUST00000158119 127 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm25935-201ENSMUST00000178746 107 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm27793-201ENSMUST00000183405 76 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Mir1291-201ENSMUST00000199842 117 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm36189-201ENSMUST00000204113 523 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 AC154328.1-201ENSMUST00000225875 307 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm25636-201ENSMUST00000082666 133 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Snord104-201ENSMUST00000083192 70 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Snora34-201ENSMUST00000083402 138 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.78□□□□□ -1.96
Ushbp1Q8R370 Gm12512-201ENSMUST00000119620 217 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm23230-201ENSMUST00000157298 133 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm22535-201ENSMUST00000158174 119 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm24210-201ENSMUST00000158263 133 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm25051-201ENSMUST00000158602 249 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Mir1936-201ENSMUST00000158699 93 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm20613-201ENSMUST00000175828 345 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm27369-201ENSMUST00000185182 71 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm37918-201ENSMUST00000192071 120 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm18188-201ENSMUST00000219386 478 ntBASIC2.77□□□□□ -1.97
Ushbp1Q8R370 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm24896-201ENSMUST00000122741 135 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm17113-201ENSMUST00000170118 171 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm22264-201ENSMUST00000178200 107 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm27399-201ENSMUST00000184250 78 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm44564-201ENSMUST00000207985 180 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Snora19-201ENSMUST00000082962 132 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm23658-201ENSMUST00000083233 132 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm24453-201ENSMUST00000083346 76 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm24762-201ENSMUST00000083689 104 ntBASIC2.76□□□□□ -1.97
Ushbp1Q8R370 Gm24212-201ENSMUST00000158258 132 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm25711-201ENSMUST00000158633 128 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm24813-201ENSMUST00000175310 84 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm24573-201ENSMUST00000175499 112 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm27285-201ENSMUST00000183875 127 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm28992-201ENSMUST00000190534 139 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Gm37997-201ENSMUST00000193515 267 ntBASIC2.75□□□□□ -1.97
Ushbp1Q8R370 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms