Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm26230-201ENSMUST00000180141 79 ntBASIC3.75□□□□□ -1.81
Trim47Q8C0E3 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.75□□□□□ -1.81
Trim47Q8C0E3 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.75□□□□□ -1.81
Trim47Q8C0E3 Gm9712-201ENSMUST00000210842 311 ntBASIC3.75□□□□□ -1.81
Trim47Q8C0E3 Gm23790-201ENSMUST00000083013 107 ntBASIC3.75□□□□□ -1.81
Trim47Q8C0E3 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Trim47Q8C0E3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim47Q8C0E3 Gm22079-201ENSMUST00000157592 106 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 Snord11-201ENSMUST00000158468 84 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 Mir7667-201ENSMUST00000183866 63 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 AC126939.1-201ENSMUST00000224943 226 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 Gm22507-201ENSMUST00000082773 160 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 AF357428-201ENSMUST00000083815 69 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.74□□□□□ -1.81
Trim47Q8C0E3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Mir5127-201ENSMUST00000175295 71 ntBASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Gm22129-201ENSMUST00000179034 107 ntBASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Gm25588-201ENSMUST00000082501 140 ntBASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Trim47Q8C0E3 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Gm23609-201ENSMUST00000104542 127 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Gm11471-201ENSMUST00000121824 198 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Gm24572-201ENSMUST00000175505 88 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Gm27869-201ENSMUST00000184327 122 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Mir1291-201ENSMUST00000199842 117 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Gm9765-201ENSMUST00000043170 321 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Snora34-201ENSMUST00000083402 138 ntBASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim47Q8C0E3 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.81
Trim47Q8C0E3 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Trim47Q8C0E3 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
Trim47Q8C0E3 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
Trim47Q8C0E3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.71□□□□□ -1.82
Trim47Q8C0E3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Gm22451-201ENSMUST00000122803 151 ntBASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim47Q8C0E3 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Gm22979-201ENSMUST00000082609 159 ntBASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Gm23507-201ENSMUST00000083078 107 ntBASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim47Q8C0E3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim47Q8C0E3 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Gm25610-201ENSMUST00000104016 129 ntBASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Gm24837-201ENSMUST00000158683 81 ntBASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Mir6914-201ENSMUST00000184999 69 ntBASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Gm37081-201ENSMUST00000192034 196 ntBASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.7□□□□□ -1.82
Trim47Q8C0E3 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim47Q8C0E3 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Gm22722-201ENSMUST00000157467 132 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Gm22833-201ENSMUST00000158292 132 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Gm22527-201ENSMUST00000158816 106 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Gm44921-201ENSMUST00000205290 301 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Gm24203-201ENSMUST00000082949 114 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Mir9-2-201ENSMUST00000083490 72 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Mir34c-201ENSMUST00000083653 77 ntBASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim47Q8C0E3 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm24118-201ENSMUST00000103972 126 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm22023-201ENSMUST00000104354 130 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm12858-201ENSMUST00000121913 208 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm26100-201ENSMUST00000157245 127 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm24908-201ENSMUST00000157294 127 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm23559-201ENSMUST00000157824 103 ntBASIC3.68□□□□□ -1.82
Trim47Q8C0E3 Gm25012-201ENSMUST00000158396 164 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms