Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Gm24670-201ENSMUST00000104154 132 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Gm25961-201ENSMUST00000157174 135 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Gm16162-201ENSMUST00000162296 297 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Gm27786-201ENSMUST00000184337 70 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Mir3961-201ENSMUST00000198795 59 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Gm43199-201ENSMUST00000200019 307 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Gm23738-201ENSMUST00000082828 171 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.19□□□□□ -1.9
Best3Q6H1V1 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Best3Q6H1V1 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Best3Q6H1V1 Gm9009-201ENSMUST00000117321 326 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm25223-201ENSMUST00000158200 110 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm37997-201ENSMUST00000193515 267 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm37624-201ENSMUST00000193751 219 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm44320-201ENSMUST00000199276 86 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm6105-201ENSMUST00000200580 624 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm45013-201ENSMUST00000206883 178 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm18188-201ENSMUST00000219386 478 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm25142-201ENSMUST00000082698 107 ntBASIC3.18□□□□□ -1.9
Best3Q6H1V1 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm23889-201ENSMUST00000122689 104 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm25866-201ENSMUST00000158245 112 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm25051-201ENSMUST00000158602 249 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm23182-201ENSMUST00000158688 135 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm25642-201ENSMUST00000175137 66 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Mir3106-201ENSMUST00000175401 82 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm27285-201ENSMUST00000183875 127 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm6109-201ENSMUST00000223297 348 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.17□□□□□ -1.9
Best3Q6H1V1 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Best3Q6H1V1 Gm25267-201ENSMUST00000158522 63 ntBASIC3.16□□□□□ -1.9
Best3Q6H1V1 Gm29658-201ENSMUST00000185404 230 ntBASIC3.16□□□□□ -1.9
Best3Q6H1V1 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.16□□□□□ -1.9
Best3Q6H1V1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Best3Q6H1V1 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Best3Q6H1V1 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Best3Q6H1V1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Best3Q6H1V1 Gm16032-201ENSMUST00000118534 168 ntBASIC3.15□□□□□ -1.91
Best3Q6H1V1 Gm13913-201ENSMUST00000121126 260 ntBASIC3.15□□□□□ -1.91
Best3Q6H1V1 Gm22227-201ENSMUST00000157356 259 ntBASIC3.15□□□□□ -1.91
Best3Q6H1V1 Gm22330-201ENSMUST00000158068 115 ntBASIC3.15□□□□□ -1.91
Best3Q6H1V1 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.15□□□□□ -1.91
Best3Q6H1V1 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.15□□□□□ -1.91
Best3Q6H1V1 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.15□□□□□ -1.91
Best3Q6H1V1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.15□□□□□ -1.91
Best3Q6H1V1 Gm24698-201ENSMUST00000083883 130 ntBASIC3.15□□□□□ -1.91
Best3Q6H1V1 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.15□□□□□ -1.91
Best3Q6H1V1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Best3Q6H1V1 Mir693-201ENSMUST00000102187 89 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Snord89-201ENSMUST00000104516 110 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Gm12449-201ENSMUST00000117572 234 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Gm14748-201ENSMUST00000119819 411 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.14□□□□□ -1.91
Best3Q6H1V1 Gm26150-201ENSMUST00000157426 151 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Gm22075-201ENSMUST00000158599 192 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Gm22666-201ENSMUST00000158717 164 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Gm44903-201ENSMUST00000206840 130 ntBASIC3.14□□□□□ -1.91
Best3Q6H1V1 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Best3Q6H1V1 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Best3Q6H1V1 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Best3Q6H1V1 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Best3Q6H1V1 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
Best3Q6H1V1 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Best3Q6H1V1 Gm27928-201ENSMUST00000183747 256 ntBASIC3.13□□□□□ -1.91
Best3Q6H1V1 Gm29597-201ENSMUST00000188035 308 ntBASIC3.13□□□□□ -1.91
Best3Q6H1V1 Gm26204-201ENSMUST00000082906 107 ntBASIC3.13□□□□□ -1.91
Best3Q6H1V1 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Best3Q6H1V1 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Best3Q6H1V1 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Best3Q6H1V1 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Best3Q6H1V1 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Best3Q6H1V1 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Best3Q6H1V1 Mir542-201ENSMUST00000102186 85 ntBASIC3.12□□□□□ -1.91
Best3Q6H1V1 Gm24049-201ENSMUST00000102409 100 ntBASIC3.12□□□□□ -1.91
Best3Q6H1V1 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.12□□□□□ -1.91
Best3Q6H1V1 Gm22731-201ENSMUST00000158086 94 ntBASIC3.12□□□□□ -1.91
Best3Q6H1V1 Rnu7-201ENSMUST00000158458 62 ntBASIC3.12□□□□□ -1.91
Best3Q6H1V1 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.12□□□□□ -1.91
Best3Q6H1V1 Gm45791-201ENSMUST00000212908 352 ntBASIC3.12□□□□□ -1.91
Best3Q6H1V1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Best3Q6H1V1 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.11□□□□□ -1.91
Best3Q6H1V1 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Best3Q6H1V1 Gm9156-201ENSMUST00000189660 463 ntBASIC3.11□□□□□ -1.91
Best3Q6H1V1 Gm44491-201ENSMUST00000196794 96 ntBASIC3.11□□□□□ -1.91
Best3Q6H1V1 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.11□□□□□ -1.91
Best3Q6H1V1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Best3Q6H1V1 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Best3Q6H1V1 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.11□□□□□ -1.91
Best3Q6H1V1 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm24276-201ENSMUST00000102181 110 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm24015-201ENSMUST00000157725 232 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm25371-201ENSMUST00000158162 101 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Gm22989-201ENSMUST00000158313 86 ntBASIC3.1□□□□□ -1.91
Best3Q6H1V1 Mir721-201ENSMUST00000200230 88 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 138.4 ms